Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0544 ATGGATAGGTATCAGAGGGTGGAGAAGCCCAAGGCTGAGACTCCTATAAACGAGAATGAGATACGCATTACTACCCAGGGCAGGATGAGAAACTATATTACTTATGCCACCATTCTCCTCCAGGAGAAAGGATCTGATGAGATTGTTCTAAAAGCAATGGGCAGGGCTATCAATAAGGCTGTTATGATCACTGAACTGATCAAGCGAAGGATTGTTGGTCTGCACCAAATTAATGCAATTGGTTCAACTGATATAACGGACACGTGGGAGCCTCTTGAAGAAGGCTTACTTCCTTTGGAGACTACTCGCCATGTTTCAATGATCACAATTACTTTGTCAAAGAAACAGCTGGACACATCCTCCTCCGGATACCAACCTCCGCTTCCAGCTGATCAAGTAAAACCTTTAAATGAATATGAAGATGAAGGAGAAAGCTCTCCAATGGTGCGGGGAAGGGGAAGGGGTCAGGGTCGTGGAAGAGGCAGGGGAAATTACAATGGAGGCAAGGAATATTATGGAGATGGATGGGATGGTGGGCGAAGCTATGGTGGCAGAGGACGTGGCCGCTCAAGGGGTCGTGGTAGAGGACGTGGCCATGGCTATGGGGGCCAGTCTCTTGGGTACTATGATTATGCTGAATACGATGCACCTCCTGCACCACGTGGCGGTTTTGGAGGGCGTGGCCGTGGAAGGGGAAGGGGCCGTGGCCGTGGTCGTAATAGTAGATTAGATGGAGCAGGTCGTGGTGTTGCTGCATGA 759 0.4954 MDRYQRVEKPKAETPINENEIRITTQGRMRNYITYATILLQEKGSDEIVLKAMGRAINKAVMITELIKRRIVGLHQINAIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKQLDTSSSGYQPPLPADQVKPLNEYEDEGESSPMVRGRGRGQGRGRGRGNYNGGKEYYGDGWDGGRSYGGRGRGRSRGRGRGRGHGYGGQSLGYYDYAEYDAPPAPRGGFGGRGRGRGRGRGRGRNSRLDGAGRGVAA 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0544 252 MobiDBLite consensus disorder prediction 139 252 - -
Lele23g0544 252 Pfam Alba 19 83 IPR002775 GO:0003676
Lele23g0544 252 SUPERFAMILY AlbA-like 16 129 IPR036882 GO:0003676
Lele23g0544 252 FunFam DNA/RNA-binding protein Alba 1 15 117 - -
Lele23g0544 252 Gene3D - 14 118 IPR036882 GO:0003676
Lele23g0544 252 PANTHER RIBONUCLEASE P SUBUNIT P25 1 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0544 Lele-ChrLele23 3980740 3983564 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0472 01 2777438 2780201 Lele23g0544 23 3980740 3983564 CCT
Lele02g0457 02 2740003 2742988 Lele23g0544 23 3980740 3983564 CCT
Lele03g0481 03 2780659 2783425 Lele23g0544 23 3980740 3983564 CCT
Lele04g0476 04 2860193 2861808 Lele23g0544 23 3980740 3983564 CCT
Lele23g0544 23 3980740 3983564 Lele24g1413 24 20142901 20146322 ECH
Lele23g0544 23 3980740 3983564 Lele23g0544 23 3980740 3983564 ECH
Lele21g1468 21 23085948 23088799 Lele23g0544 23 3980740 3983564 hybridization
Lele22g1461 22 20432109 20435515 Lele23g0544 23 3980740 3983564 hybridization