Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0472 ATGGCCTCCATTGAGGTAGACTACACGGTTGTCAAAGACGACAACGACGAATCACCGATCGAGGAGGTCCGTGTGACGGTACCCAATGACGATGACCCCACCCTACCGGTTTGGACATTCCGGATGTGGTTTCTGGGTCTCATCTCAGTGGCGCTCCTCTCCTTCGTCAACACCTTCTTCCAGTACAGGGCTGAGCCTATGGTCGTAACCATGATCTCTGTTCAGGTCGCTACGCTTCCGATCGGCAAGTTCATGGCAAAGGTTCTGCCAACAACCAAGTTTCGGGTCCTCGGGTGGGAGTTCTCACTCAACCCGGGTCCGTTTAACGTGAAGGAGCACGTACTCATCTCCATTTTCGCCAACGTCGCCGGCAACACTGCTTACGCCGTGAGTATCGTAAACATCATAAAGGCTTTTTACGGAAGAAACATCCGTTTCGTAGCTGGTTGGATCCTTGTCATCACAACGCAGGTTTTGGGCTATGGATGGGCTGGAATACTGAGGAAGTACGTCGTAGAGCCTGCGCATATGTGGTGGCCTTCTACTCTCGTCCAAGTCTCCTTGTTCAGGGCTTTACATGAAAAAGATCATAAGAGGATGTCGCGCGGGAAATTCTTTTTAATAGCATTTGTATGCAGCTTTGCATGGTACGTTGTGCCAGGCTATCTTTTTCCAACGCTATCAGCAATTTCATGGGTATGTTGGGCGTTTCCCAAATCAGTAACAGCCCAACAAATAGGCTCAGGCATGCAGGGACTTGGTTTGGGTGCTTTTGCCTTTGATTGGACGGTTGTTTCTTCCTACCTTGAAAGCCCTCTCGTTTCCCCCTTCTTTGCAATCGCCAATGTCACCGTCGGCTACATCTTAGTCATCTACGTCATGATGCCGTTGGTGTATTGGGTTTTCAATGTCTATAATGCTAGGACCTTCCCTATCTACTCCAATGAACTCTTCGATTCCAAAGGTCTGCGATATAATGTCACAGCCATTGTCAATGACAATTTCCAGATTAATTTGGAGCAGTATGTCAAACAAGGTCGTGTGAATCTTAGTGCCTTCTTTGCTGTGACCTATGGCATCGGTTTTGCTGCTATTGTTTCTACTTTGTCTCACGTCGCCATTTTTAATGGCAGCGAGATATATAAACGATTCAGAGCTTCACGTACTGATCAAAATGAGGACGTTCACATGAGATTGATGAAGAAGTATAAGGACATTCCCAACTGGTGGTTTTATGCGACTCTTGGAGTCTCATTTGTTCTTTCACTTGTACTCTGTATTTTCATGAAAAGCGAGGTACAATTACCTTGGTGGGCACTCATCTTTGCAGCTGCGCTTGCTTTTATTTTCACTCTTCCCATCAGCATCATAAGGGCCACCACTAATCAGTTTCCAGGATTGAATATCATCACAGAGTATTTAATGGGTGTGATATCACCAGGCCAACCAATAGCCAACGTTTGCTTTAAGACCTACGGCTACATAAGTATGTACCAGGCTGTCTTCTTCTTAAGTGATTTCAAGCTAGGACATTACATGAAGATCCCCCCACGTTCCATGTTCATTGTTCAGATCATAGGGACTATAGTAGCTGGAACCATCAACATTGGCGTGGCATGGTGGCTTCTGACTTCAATAAACGACATATGTCATGCGAACGCACTGCCTGCAAACAGTCCATGGACGTGTCCGAGTGATAACGTCTTCTTTGATGCGTCGGTGATTTGGGGTTTGGTTGGTCCAAAACGAATCTTCGGATCTCTTGGGAATTACGCAGCTCTGAACTGGTTCTTCCTTGTGGGTGCATTGGGACCATTATTAGTTTGGCTTCTTCAGAGAGCCTTCCCTAAGCAGAAATGGATCTCCCACATCCACTTTCCTGTGCTTCTCGGTGCAACGGCCATGATGCCACCGGCTAGTCCGGTCAACTTCAATTGTTGGATCGTTGTCGGGACCATCTTTAATTACTTCGTATACAATTATCGTAAGAAGTGGTGGCAACGTTACAACTATGTTCTTTCAGCTGCTTTGGATGCTGGTACTGCTATGATGACGCTTCTTCTCTTCTTTACTCTCACCATGGAGAATAAGACCTTGAATTGGTGGGGTTCGTCTGGCGAGCACTGTGATCTCGCCACGTGTCCTACCGCCAAGGGTATAGCTGTTCCTGATTGTCCTGCATATTATTGA 2190 0.4662 MASIEVDYTVVKDDNDESPIEEVRVTVPNDDDPTLPVWTFRMWFLGLISVALLSFVNTFFQYRAEPMVVTMISVQVATLPIGKFMAKVLPTTKFRVLGWEFSLNPGPFNVKEHVLISIFANVAGNTAYAVSIVNIIKAFYGRNIRFVAGWILVITTQVLGYGWAGILRKYVVEPAHMWWPSTLVQVSLFRALHEKDHKRMSRGKFFLIAFVCSFAWYVVPGYLFPTLSAISWVCWAFPKSVTAQQIGSGMQGLGLGAFAFDWTVVSSYLESPLVSPFFAIANVTVGYILVIYVMMPLVYWVFNVYNARTFPIYSNELFDSKGLRYNVTAIVNDNFQINLEQYVKQGRVNLSAFFAVTYGIGFAAIVSTLSHVAIFNGSEIYKRFRASRTDQNEDVHMRLMKKYKDIPNWWFYATLGVSFVLSLVLCIFMKSEVQLPWWALIFAAALAFIFTLPISIIRATTNQFPGLNIITEYLMGVISPGQPIANVCFKTYGYISMYQAVFFLSDFKLGHYMKIPPRSMFIVQIIGTIVAGTINIGVAWWLLTSINDICHANALPANSPWTCPSDNVFFDASVIWGLVGPKRIFGSLGNYAALNWFFLVGALGPLLVWLLQRAFPKQKWISHIHFPVLLGATAMMPPASPVNFNCWIVVGTIFNYFVYNYRKKWWQRYNYVLSAALDAGTAMMTLLLFFTLTMENKTLNWWGSSGEHCDLATCPTAKGIAVPDCPAYY 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0472 729 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 21 692 IPR004813 GO:0035673
Lele01g0472 729 Pfam OPT oligopeptide transporter protein 38 691 IPR004813 GO:0035673
Lele01g0472 729 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 16 696 IPR004648 GO:0055085
Lele01g0472 729 PANTHER ISP4 LIKE PROTEIN 12 726 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0472 Lele-ChrLele01 2777438 2780201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0472 13 726 Organic Solute Cotransporters AT5G64410 71.151 0.0 1093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0472 01 2777438 2780201 Lele21g1468 21 23085948 23088799 CCT
Lele01g0472 01 2777438 2780201 Lele22g1461 22 20432109 20435515 CCT
Lele01g0472 01 2777438 2780201 Lele23g0544 23 3980740 3983564 CCT
Lele01g0472 01 2777438 2780201 Lele24g1413 24 20142901 20146322 CCT
Lele01g0472 01 2777438 2780201 Lele01g0472 01 2777438 2780201 ECH
Lele01g0472 01 2777438 2780201 Lele03g0481 03 2780659 2783425 hybridization
Lele01g0472 01 2777438 2780201 Lele04g0476 04 2860193 2861808 hybridization