Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0457 ATGGGAGAAGAATGTAAGCTGTCTCCAGCTAGGATACATGTCAAAATGGTTTTGGGCTATGGATGGGCTGGAATGCTGAGGAAGTACGTCGTAGAGCCTGTTCACATGTGGTGGCCTTCTACTCTCGTCCAAGTCTCCCTGTTCAGCTTGGCATGGTACGTTGTGCCAAGCTATCTTTTTCCGAAGCTATCTGCAATTTCATGGGGACTTGGTTTGGATGCTTTTGCCCTTGATTGGACCGTTCTTTCTTCCTACCTTGAAAGCCCTCTCGTTTCCCCCTTGTTTGCAATCGCTAACGTCACCGTAGGCTACATCTTAGTTATCTACGTCATAATGCCGTTGGTGTATTGGGTCTTCAGTGTCTATAATGCCAAGACCTTCCCTATCTTCTCCAATGAACTCTTCGATTCCAAAGGTCTTCAATATAACGTAGCCGCCATTGTTAACGACAATTTCCAGATTGATTTGGAGCAGTATGCTAAACAAGGTCGTGTGAATCTTGGTATCTTCTTTGCTGTTACCTATGGCATCGGTTTTGCTGCTATTATTTCTACTTTATCTCACGTCGCCATTTTTAATGGCAGGTACAATTACCTCGGTGTGCTCGTACCTTTGCAGCTGCGCTTGCTTTTAGTCACTCTTCCCATTAGCATCATAAGGGCCACCACTAATCAGTTTCCAGGATTGAATATCATCACAGAGTATTTAATGAGTGTGATATCACCAGGCCAACCAATAGCCAACGTTTGCTTCAAGACCTATGGCTACATAAGTATGTATCAGGCTGTCTTCTTAAATCATAGGGACTATAATAGCTGGAACGGTCAACATTGGCGTGGCGTGGGGATTCTGATGACTTCAATGAACGACATATGTCGTGCAAAAGCATTGCCTGCAAACAGTCCATGGACATGTCCAACTGATAATTTCTTTGATTCGGGGTTTGCTGAAGCAGAAGTTCATGCACCCCTGGGGTCCACTTATTCTGGTTCCAGAAGTTATCTGTTTTGTTGGGCACGAAAGAAACAAGAAGACAAACCTGATGGATACTTAGGTCATGAAACCTATGCTTTGTAA 1077 0.441 MGEECKLSPARIHVKMVLGYGWAGMLRKYVVEPVHMWWPSTLVQVSLFSLAWYVVPSYLFPKLSAISWGLGLDAFALDWTVLSSYLESPLVSPLFAIANVTVGYILVIYVIMPLVYWVFSVYNAKTFPIFSNELFDSKGLQYNVAAIVNDNFQIDLEQYAKQGRVNLGIFFAVTYGIGFAAIISTLSHVAIFNGRYNYLGVLVPLQLRLLLVTLPISIIRATTNQFPGLNIITEYLMSVISPGQPIANVCFKTYGYISMYQAVFLNHRDYNSWNGQHWRGVGILMTSMNDICRAKALPANSPWTCPTDNFFDSGFAEAEVHAPLGSTYSGSRSYLFCWARKKQEDKPDGYLGHETYAL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0457 358 Pfam OPT oligopeptide transporter protein 47 195 IPR004813 GO:0035673
Lele02g0457 358 Pfam OPT oligopeptide transporter protein 210 262 IPR004813 GO:0035673
Lele02g0457 358 PANTHER ISP4 LIKE PROTEIN 199 263 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0457 Lele-ChrLele02 2740003 2742988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0457 12 313 Organic Solute Cotransporters AT5G64410 45.346 4.80e-103 317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0457 02 2740003 2742988 Lele21g1468 21 23085948 23088799 CCT
Lele02g0457 02 2740003 2742988 Lele22g1461 22 20432109 20435515 CCT
Lele02g0457 02 2740003 2742988 Lele23g0544 23 3980740 3983564 CCT
Lele02g0457 02 2740003 2742988 Lele24g1413 24 20142901 20146322 CCT
Lele02g0457 02 2740003 2742988 Lele02g0457 02 2740003 2742988 ECH
Lele02g0457 02 2740003 2742988 Lele03g0481 03 2780659 2783425 hybridization
Lele02g0457 02 2740003 2742988 Lele04g0476 04 2860193 2861808 hybridization