Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0476 ATGAACGACAGGGCTTTACATAAAAAAGACCATAGGAGGATGTCGCTCGGGAAATTCTTTTCAATAGCATTTGTATGCAGCTTGGCATGGTACGTTGTGCCAGGCTATCTTTTTCCGACGCCATCAGCAATTTCATGGGTATGTTGGGCGTTTCCCAAATCAGTAACAGCCCCACAAATTGGATCAGGCATGCAGGGACTTGGTTTGGATGCTTTTGCCCTTGATTGGACCGTTCTTTCTTCCTACCTTGAAAGCCCTCTCGTTTCCCCCCTCTTTGCAATCGCTAACGTCACCGTCGGCTACATCTTAGTTATCTACGTCATAATGCCGTTGGTGTATTGGGTCTTCAATGTCTATAATGCCAAGACCTTACCTATCTTCTCCAATGAACTCTTCGATTCCACAGGTCTTCAATATAACGTAACCGCCATTGTTAACGACAATTTCCAGATTGATTTGGAGCAGTATGCTAAACAAGGTCGTGTGAATCTTAGTATCTTGTTTGCTGTGACCTATGGCATCGTTTTGCTGCTATTATTTCTACTTTGTCTCACGTCGCCATTTTTAATGGCAGACAGTTCAATGCAGGGAGATATATCTACGATTCAAAGCTTCACGTACAGATCAAAACCAGGACATTCGCACGAGATTGATGAACTGCGCTTGCTTTCTTTTATTGTCACTCTTCCCATTAGCATCATAAGGGCCACCACTAATAAGTTTCCAGGATTGAATATCATCACAGAGTATTTAATGGGTGTGATATCACCAGGCCAACCAATAGCCAACGTTTGCTTCAAGACCTATGGCTACATAATTATGTATCAGGCTGTCTTCTTCTTAAGTGATTTCAAGCTAGGGCATCACATGAAGATCCCCCCAAGTTCCATGTTCATTGTTCAGACAGCCTTCCCTAAGCATGAATTAATGGATCTCCCACATTCACTTCCCTGTGCTTCTCGGTGCAACGGCCATGATGCCACCGGCTAG 990 0.4384 MNDRALHKKDHRRMSLGKFFSIAFVCSLAWYVVPGYLFPTPSAISWVCWAFPKSVTAPQIGSGMQGLGLDAFALDWTVLSSYLESPLVSPLFAIANVTVGYILVIYVIMPLVYWVFNVYNAKTLPIFSNELFDSTGLQYNVTAIVNDNFQIDLEQYAKQGRVNLSILFAVTYGIVLLLLFLLCLTSPFLMADSSMQGDISTIQSFTYRSKPGHSHEIDELRLLSFIVTLPISIIRATTNKFPGLNIITEYLMGVISPGQPIANVCFKTYGYIIMYQAVFFLSDFKLGHHMKIPPSSMFIVQTAFPKHELMDLPHSLPCASRCNGHDATG 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0476 329 PANTHER ISP4 LIKE PROTEIN 4 179 IPR004648 GO:0055085
Lele04g0476 329 Pfam OPT oligopeptide transporter protein 4 204 IPR004813 GO:0035673
Lele04g0476 329 Pfam OPT oligopeptide transporter protein 222 302 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0476 Lele-ChrLele04 2860193 2861808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0476 4 301 Organic Solute Cotransporters AT1G09930 54.790 1.23e-114 346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0476 04 2860193 2861808 Lele21g1468 21 23085948 23088799 CCT
Lele04g0476 04 2860193 2861808 Lele22g1461 22 20432109 20435515 CCT
Lele04g0476 04 2860193 2861808 Lele23g0544 23 3980740 3983564 CCT
Lele04g0476 04 2860193 2861808 Lele24g1413 24 20142901 20146322 CCT
Lele04g0476 04 2860193 2861808 Lele04g0476 04 2860193 2861808 ECH
Lele01g0472 01 2777438 2780201 Lele04g0476 04 2860193 2861808 hybridization
Lele02g0457 02 2740003 2742988 Lele04g0476 04 2860193 2861808 hybridization