Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0244 ATGCTCTTGCTTTGTGGTCGTAAGAGAGTGAAAGCAAGCAAAGGCATGAAGGCGACACTGAGATACTTAGCAGGAACGGCAGGGCCTAGTGGTTATGGCTCTAATTCAACAGCCGAGCAAGTCACTGAAGATTGCTCTTGCTTACTCTCTTCTCATCATCTAACTGCTCTCATCACAGGTGGGACATCTGGGATTGGAGCAGAAACAGCGAGAGTGTTGGCAAAGAGAGGAGTGAGGGTAGTGATTGGAGCGAGGGACATGAAGAAGGGGAGAGAAGTGAGACAGAATATTCAGAAAGAATCTCCGAACGCTGAGGTTATAGTGTTGGAAATCGATCTCAGTTCTTTCGCTTCTGTTCAGAGATTTTGTTCTGAGTTTTTGGCTCTTCAACTTCCCCTCAATATCCTCATAAACAATGCCGGAATATTCTCTCAGAACTTGGAGTTCTCCGAAGAGAAAATTGAGATGACATTTGCCACCAATTACTTGGGACATTTTTTGTTGACAGAAATGCTGCTAGAGAAAATGATAGAAACAGCAGAGAAGAGTGGAATCGAAGGAAGGATCATTAATGTGTCTTCTGTGATCCATAGCTGGGTCAAGAGACATGCCTTTCGTTTCCACGACTTGCTCCATGGAACAAAGTATAATGGCACACGTGCATATTCCCAATCAAAATTGGCCAATATTTTGCATGCCAAGGAATTGTCCAGGCAGCTTAAGGCAAGGAATGCAAATGTAACAGTGAATGCAGTTCATCCGGGGATTGTGAAGACAGGAATTATCAGAGCTCACAAAGGCCTCATAACGGATTCCCTGTTCTTCATTGCATCAAAGTTGCTGAAATCAACATGTCAGGGCGCAGCAACAACTTGCTATGTAGCAGTGAGTGGAAAAACACAAGGGTTGAGTGGGAAATACTTGGCAGATTGTAATGAGAGTAACTGTTCAAGTTTAGCAAACGACGAATTTGAAGCTCAGAAGCTATGGAACAACACTCGAGCTTTGCTTCAAAAACGACTGCGTCAAGCCTCTTCTCAATAA 1044 0.4377 MLLLCGRKRVKASKGMKATLRYLAGTAGPSGYGSNSTAEQVTEDCSCLLSSHHLTALITGGTSGIGAETARVLAKRGVRVVIGARDMKKGREVRQNIQKESPNAEVIVLEIDLSSFASVQRFCSEFLALQLPLNILINNAGIFSQNLEFSEEKIEMTFATNYLGHFLLTEMLLEKMIETAEKSGIEGRIINVSSVIHSWVKRHAFRFHDLLHGTKYNGTRAYSQSKLANILHAKELSRQLKARNANVTVNAVHPGIVKTGIIRAHKGLITDSLFFIASKLLKSTCQGAATTCYVAVSGKTQGLSGKYLADCNESNCSSLANDEFEAQKLWNNTRALLQKRLRQASSQ 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0244 347 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 55 314 IPR036291 -
Lele23g0244 347 Gene3D - 48 342 - -
Lele23g0244 347 PANTHER RETINOL DEHYDROGENASE 29 336 - -
Lele23g0244 347 PRINTS Glucose/ribitol dehydrogenase family signature 222 241 IPR002347 -
Lele23g0244 347 PRINTS Glucose/ribitol dehydrogenase family signature 55 72 IPR002347 -
Lele23g0244 347 PRINTS Glucose/ribitol dehydrogenase family signature 181 197 IPR002347 -
Lele23g0244 347 PRINTS Glucose/ribitol dehydrogenase family signature 245 262 IPR002347 -
Lele23g0244 347 PRINTS Glucose/ribitol dehydrogenase family signature 131 142 IPR002347 -
Lele23g0244 347 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 142 IPR002347 -
Lele23g0244 347 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 187 195 IPR002347 -
Lele23g0244 347 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 222 241 IPR002347 -
Lele23g0244 347 Pfam short chain dehydrogenase 55 196 IPR002347 -
Lele23g0244 347 CDD retinol-DH_like_SDR_c_like 55 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0244 Lele-ChrLele23 1671886 1674520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0244 34 261 Acyl Lipid Metabolism Gene Families AT1G63380 27.468 5.46e-13 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0244 23 1671886 1674520 Lele17g1075 17 21237854 21241181 CCT
Lele23g0244 23 1671886 1674520 Lele18g0466 18 2721505 2725005 CCT
Lele23g0244 23 1671886 1674520 Lele19g0486 19 2752596 2755928 CCT
Lele23g0244 23 1671886 1674520 Lele20g0970 20 15772583 15776078 CCT
Lele23g0244 23 1671886 1674520 Lele23g0244 23 1671886 1674520 ECH
Lele21g1763 21 25369626 25372323 Lele23g0244 23 1671886 1674520 hybridization
Lele22g1738 22 22724530 22727301 Lele23g0244 23 1671886 1674520 hybridization