Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0238 ATGGCGCTTCGTCTGGGTCCAAGTTTCAGCCATCCTCTGATCGCTTCCAGCGTTTCCGTCACAACCACTCGCCAAACCCAAATCCGCAGGTGTTCGATTCGGAGCTGTATCCTGGAACCAACGAGTCACGCAAGTTATCAAACCGTTTCCTGTCTAACTTATTCAGCTACTACAGCGTCAGTATCTTTTAAAATTATGCAGCTAGTGCTGGAAGTGAAGGAGAAGCTTGAGAAAGAATACCCCAGCCTCCCTGTAGGTAGAAATGGAAGAGATGACGAGGATATGATTCTTTGGTTTCTGAAAGATCGCAGGTTTTCTGTTGAAGAAGCTGTGGCAAGGTTGACTAAAGCCATTGTATCCTTCACATAA 369 0.4607 MALRLGPSFSHPLIASSVSVTTTRQTQIRRCSIRSCILEPTSHASYQTVSCLTYSATTASVSFKIMQLVLEVKEKLEKEYPSLPVGRNGRDDEDMILWFLKDRRFSVEEAVARLTKAIVSFT 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0238 122 SUPERFAMILY CRAL/TRIO N-terminal domain 64 117 IPR036273 -
Lele23g0238 122 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 40 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0238 Lele-ChrLele23 1637676 1638329 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0238 23 1637676 1638329 Lele17g1066 17 21187144 21190000 CCT
Lele23g0238 23 1637676 1638329 Lele18g0475 18 2783042 2786008 CCT
Lele23g0238 23 1637676 1638329 Lele19g0494 19 2808340 2811216 CCT
Lele23g0238 23 1637676 1638329 Lele20g0961 20 15709522 15712818 CCT
Lele23g0238 23 1637676 1638329 Lele23g0238 23 1637676 1638329 ECH
Lele22g1746 22 22765429 22768451 Lele23g0238 23 1637676 1638329 hybridization