Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0220 ATGGCTTGTTGTCACCGACTACGCCTCAAAACTACGAGCTCCTGCAAGCACCTTCTTCGCCGCCCATTGCAATTCCTCTGGCGGTCCCAGCTTCCTCCTCCTCCTGGTTATATTGCAATCATGGAACGAGCAATCTTTCTTCACGATGGGCCTGTGTCGAAGTTCAAATTCGACGACACTGCAACTGAGCACGATTCTGGGGATGGGTCAAATGATATGAATGTTAAGAAGTCGGTTTGGGAGCCAGCAAGCAACGAGAATTCCACCCTTTCCGATTGCGAAAGTGGTGTTTCTGGAGGTAACTACGTGCAGCGTAGTTTGTTCGATGAAGGCTTTGTACAACTCATAGAAGGTGACAGGGTTCATGACCTTATTCAGAGAAGGTTCATTCTGAGTTTGGGGCTGCTTGGCGCACAAACCAAAGTCGTCGCGATTCATAGAAATGCTTGTTCTGGCGTTATGTCACAGGCCAGAGTTCAATCGTTTCAGCTTTATCTGGAAGCAATGCAGAAGAGGCGTAATGGTAATGCCAATTTGAAGTATGCTTGGTATGGAACTTCTGGTAGGCAAGAGGTGGAAGAGATCACTTCACACGGCTTTGGTCATTGTGGGAAATCACAGAATAACAATAATAAGCTTTATGGTTGTGGACTCTATCTTTCTCCAGATGATTCTCCTCTTGACAGTGTGAAGAATTGTGCTGTTGACAAAGACGGTGTACGGCACTTGTTACTGTGTCGTGTTATTCTGGGGAGAACAGAGCTCGTGCATCCTGGTTCTGAGCAATGCCATCCCAGGTCTGAGGATTACGATTCTGGAGTGGATAATCTTTTAGCTCCTACCAAGTACGTGATTAGTTGTAGTCGGATGAACACCCATGTCTTGCCGGAATATGTTATAAGTTTCAGAATTCCTCAAGGGTCTGCGAAGACTGAGGAGCCGTCGAGGAGGCCATCTTCCCCATGGATGCCATTTCCAACCCTAATTTCTGTGCTTTCCAAGTATTTGCCGGCCGCTGATATTGCCTTGATATCAAAGTACCATAAAGATCACAGAGGGAAAAGTATTTCACGACGCGGTCTGATACAGAAAGTGAGACAAGTTGCGGGGGACAAGTTGTTGATTGGAGTGATAAAGTCGTTTAGAGATAAGAGAACAGGAGCAAAGAAGGTCAAAGAAGGAGACAGCAGATAG 1194 0.4631 MACCHRLRLKTTSSCKHLLRRPLQFLWRSQLPPPPGYIAIMERAIFLHDGPVSKFKFDDTATEHDSGDGSNDMNVKKSVWEPASNENSTLSDCESGVSGGNYVQRSLFDEGFVQLIEGDRVHDLIQRRFILSLGLLGAQTKVVAIHRNACSGVMSQARVQSFQLYLEAMQKRRNGNANLKYAWYGTSGRQEVEEITSHGFGHCGKSQNNNNKLYGCGLYLSPDDSPLDSVKNCAVDKDGVRHLLLCRVILGRTELVHPGSEQCHPRSEDYDSGVDNLLAPTKYVISCSRMNTHVLPEYVISFRIPQGSAKTEEPSRRPSSPWMPFPTLISVLSKYLPAADIALISKYHKDHRGKSISRRGLIQKVRQVAGDKLLIGVIKSFRDKRTGAKKVKEGDSR 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0220 397 Gene3D - 112 303 - -
Lele23g0220 397 Pfam Poly(ADP-ribose) polymerase catalytic domain 171 268 IPR012317 GO:0003950
Lele23g0220 397 ProSiteProfiles RST domain profile. 316 387 IPR022003 -
Lele23g0220 397 Pfam RCD1-SRO-TAF4 (RST) plant domain 317 382 IPR022003 -
Lele23g0220 397 ProSiteProfiles PARP catalytic domain profile. 96 323 IPR012317 GO:0003950
Lele23g0220 397 SUPERFAMILY ADP-ribosylation 113 305 - -
Lele23g0220 397 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 71 384 IPR044964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0220 Lele-ChrLele23 1496996 1499330 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0220 23 1496996 1499330 Lele17g1045 17 21061727 21063129 CCT
Lele23g0220 23 1496996 1499330 Lele18g0493 18 2913919 2923185 CCT
Lele23g0220 23 1496996 1499330 Lele19g0512 19 2938558 2941788 CCT
Lele23g0220 23 1496996 1499330 Lele20g0943 20 15595001 15597569 CCT
Lele21g1789 21 25552386 25553273 Lele23g0220 23 1496996 1499330 hybridization
Lele22g1765 22 22892517 22893284 Lele23g0220 23 1496996 1499330 hybridization