Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0493 ATGGTCGGTTGCCCGGAGGTTCACGCCTTAATTTCCACCCATCCCCTATCTTCGAATCCACCCATCAACACCCTCGCCTTGCCTGATTTATCTAAAATCTCTCTCTTCTCTAAGAAGCTTGACTCCGACTCCAACACCACCACCTCTCCTCCTTCCTCCGTACCTGAAGAAGAAGCCCCCTTGGAGTTGGAGAGGAAGAGGATCGGAATCTACCGGAGAATGCTGAGGTTGGTTTCAAAGAGAATTTTGGGAGCAGCGTCGCGGGAGATGCCGGCGCCGGCGCTCCAGGTTCTGCCACGATTCTACCATGAGAGGGTTGTTGACCACTATGACAACCCACGGAATGTTGGATCATTCGAGAAGAATGATCCCGACGTCGGTACGGGCCTGGTTGGAGCACCTGCATGTGGTGATGTCATGAAGCTCCAGATTAAGGTTGATGAAAAGACCGGAAAGATTATTGATGCTTGCTTCAAGACCTTCGGCTGTGGTTCGGCTATTGCGTCTTCGTCTGTGGCTACTGAATGGGTGAAAGGAAAGCAGATGGAAGAAGTTTTATCCATTAAAAATACTGAAATTGCAAAGCATCTATCACTTCCTCCAGTTAAGCTTCACTGCAGCATGCTTGCTGAGGATGCCATCAAAGCGGCTGTTAAAGACTATGAAGCTAAGCGTGCCAAGTCAACTTATACTGAGGCAACATCTGAAGGGAAGGCTGCCACCGCTTGA 729 0.4979 MVGCPEVHALISTHPLSSNPPINTLALPDLSKISLFSKKLDSDSNTTTSPPSSVPEEEAPLELERKRIGIYRRMLRLVSKRILGAASREMPAPALQVLPRFYHERVVDHYDNPRNVGSFEKNDPDVGTGLVGAPACGDVMKLQIKVDEKTGKIIDACFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKSTYTEATSEGKAATA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0493 242 MobiDBLite consensus disorder prediction 40 60 - -
Lele18g0493 242 Gene3D - 101 241 - -
Lele18g0493 242 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 77 232 IPR002871 GO:0005506|GO:0016226|GO:0051536
Lele18g0493 242 MobiDBLite consensus disorder prediction 40 54 - -
Lele18g0493 242 FunFam Iron-sulfur cluster assembly protein 102 241 - -
Lele18g0493 242 SUPERFAMILY SufE/NifU 101 229 - -
Lele18g0493 242 Pfam NifU-like N terminal domain 102 226 IPR002871 GO:0005506|GO:0016226|GO:0051536
Lele18g0493 242 TIGRFAM iscU: FeS cluster assembly scaffold IscU 102 225 IPR011339 GO:0005506|GO:0016226|GO:0051536
Lele18g0493 242 CDD IscU_like 102 217 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0493 Lele-ChrLele18 2913919 2923185 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1789 21 25552386 25553273 Lele18g0493 18 2913919 2923185 CCT
Lele22g1765 22 22892517 22893284 Lele18g0493 18 2913919 2923185 CCT
Lele23g0220 23 1496996 1499330 Lele18g0493 18 2913919 2923185 CCT
Lele24g1726 24 22537180 22537941 Lele18g0493 18 2913919 2923185 CCT
Lele18g0493 18 2913919 2923185 Lele19g0512 19 2938558 2941788 hybridization
Lele18g0493 18 2913919 2923185 Lele20g0943 20 15595001 15597569 hybridization