Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0943 ATGAAGCTCCAGATTAAGGTTGATGAAAAGACCGGAAAGATTGTTGATGCTTGCTTCAAGACCTTCGGCTGTGGTTCGGCTATTGCGTCTTCGTCTGTGGCTACTGAATGGGTGAAAGGAAAGCAGATGGAAGAAGTTTTATCCATTAAAAACACTGAAATTGCAAAGCATCTATCACTTCCTCCAGTTAAGCTTCACTGCAGCATGCCTGCTGAGGATGCCATCAAAGCGGCTGTTAAAGACTATGAAGCTAAGCGTGCCAAGTCAACTTATACTGAGGCAACATCTGAAGGGAAGGCTGCCACCGCTTGA 312 0.4551 MKLQIKVDEKTGKIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMPAEDAIKAAVKDYEAKRAKSTYTEATSEGKAATA 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0943 103 Gene3D - 1 88 - -
Lele20g0943 103 CDD IscU_like 1 78 IPR002871 GO:0005506|GO:0016226|GO:0051536
Lele20g0943 103 FunFam Iron-sulfur cluster assembly enzyme ISCU, mitochondrial 1 87 - -
Lele20g0943 103 SUPERFAMILY SufE/NifU 1 86 - -
Lele20g0943 103 Pfam NifU-like N terminal domain 1 88 IPR002871 GO:0005506|GO:0016226|GO:0051536
Lele20g0943 103 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 1 93 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0943 Lele-ChrLele20 15595001 15597569 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1789 21 25552386 25553273 Lele20g0943 20 15595001 15597569 CCT
Lele22g1765 22 22892517 22893284 Lele20g0943 20 15595001 15597569 CCT
Lele23g0220 23 1496996 1499330 Lele20g0943 20 15595001 15597569 CCT
Lele24g1726 24 22537180 22537941 Lele20g0943 20 15595001 15597569 CCT
Lele17g1045 17 21061727 21063129 Lele20g0943 20 15595001 15597569 hybridization
Lele18g0493 18 2913919 2923185 Lele20g0943 20 15595001 15597569 hybridization