Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1361 ATGTCTGACAACGACCTTGTCTTCGAGACTTTCCGAGCTCTGGTGGAGAGCGCGGACCGCAAGTTCGCTAGGGTTCGCGACGTGCCAGCCTATGGGCGTGTTAGCCAGAACCACTTCTATCTGAAGGTTTTCAAGGCATATACGCGACTTTGGAAGTACCAGCAGGAGAACCGGTCCAAACTGGTTCAGTGCGGTCTAAAACGCTGGGAAATCGGCGAAATCGCTAGCCGAATCGGGCAACTTTACTTCGGGCAGTATATGAGGACTAGTGAGTGCAGGTACTTGGTTGAAGCATATGTCTTCTATGAAGCGATACTCAACAGAAGATATTTTGAAGGATCCGAAGGTTCTTCGAAAGATCCGGGAATTAGGTTCAAGGAATTGAGGTTTTATGCACGGTTTTTGTTGGTGTCGGTGATTTTAAACAGAATGGAGATGGTCAAGCATCTTATGGACCGTTTCATGGCTTTACTTGACGATTGTAAGAGCAACTTCCGGGAAACTAACTTAAAGGAATGGCGGCAAGTGGTGCAAGAAATTGTCCGATTTACAAAAGCTGAGAATGGCTTTGCTATCAGGCCTTTGCGTTATTGTGCCATAACTGATACTCATCAGGCTTCTCTTCCATATGTAGCTCGTTTTCATGCAAAGAGGGTTTTAAAATTTCGAGATGCCCTGTTGACAAGCTATCATAGGAATGAGGTCAAATTCGCTGAGCTTACATTAGACTCCTACAGAATGCTGCAATGTTTAGAATGGGAGCCTAGTGGATTGTTCAACCAAAAACCTATTGTTAAACCGCTTGAGAATGGGGACTCCATCGATCATTCGGGAACTTCTGGGTTAATAAATATGAACCTAGCTGCAGATATGACAGATCCAAATGTGCCTCCTAATCCAAGAAAGGCTGTTCTTTATCGTCCATCTGTAACACATCTGATAGCAGTTATGGCAGCAATTTGCGAGGAACTGCCACCAGATAGTGTTGTGCTTGTATATCTATCAGGCTCAGGGAAGGCTGGTTATAATAATATCCATCAGTTGGAGAATTTTGGAGGGGCATCGAAACATTCAAGGCACAAAGTCCTTTCTCAGGCTTCCCAGGAGCAGAGCAGTGGATCTTCTGACTCTCAAATCAACGGCAAGAGAGAATCCAGCTCCTATTACGACAACTATCTGTGGTTTGGTCCCAAGGGCATCGAAGGTTCAAACAATCTTTACCCTGGCGATCTTATTCCTTTCACCCGCAAACCTCTTTTCTTCATTATTGATAGTGATAACAGCCATGCATTCAAGGTTTTACGTGGTGCCGAAAGGGGGGAGACAGCTGCTATGTTTCTTTCTCCTTTAATGCCAGTTTTCAAGAATCCATCTGATGTGAATTTACAGAATGGAAGCCAGTTTACCTTCTTCCTGACTGCTCCTTTGTCAGCATTTTGCCAGATGGTTGGCCTGTCCCCCATTGAGGTTGACAAGGTAGTCTATGACCAAGCGGAGAACATTCTTGCCAACGCCTTTGCTGAGTGGGAAATAATTCTGTGCTCATCAACTACTAGCTTGGATTTAGTCTGGGCTCAAATCATAACTGATCCATTTTTACGGCGGCTTATTTTAAGATTCATCTTCTGCCGGTCAGCAATCTCTTTTTACTGCCCGCCTGAGGAAAGAGAGCAGTATCTACCGCTTTGCTTGCCTCACCTGCCCACACTTGTTGCACCTGGTTCTGGAGCTGTTCGTACTGCCATTGTTCAAATTGCTACGCACTTTGAAGTGGCCGACTCCTTTCACTTTAGTGATACCTAA 1803 0.4509 MSDNDLVFETFRALVESADRKFARVRDVPAYGRVSQNHFYLKVFKAYTRLWKYQQENRSKLVQCGLKRWEIGEIASRIGQLYFGQYMRTSECRYLVEAYVFYEAILNRRYFEGSEGSSKDPGIRFKELRFYARFLLVSVILNRMEMVKHLMDRFMALLDDCKSNFRETNLKEWRQVVQEIVRFTKAENGFAIRPLRYCAITDTHQASLPYVARFHAKRVLKFRDALLTSYHRNEVKFAELTLDSYRMLQCLEWEPSGLFNQKPIVKPLENGDSIDHSGTSGLINMNLAADMTDPNVPPNPRKAVLYRPSVTHLIAVMAAICEELPPDSVVLVYLSGSGKAGYNNIHQLENFGGASKHSRHKVLSQASQEQSSGSSDSQINGKRESSSYYDNYLWFGPKGIEGSNNLYPGDLIPFTRKPLFFIIDSDNSHAFKVLRGAERGETAAMFLSPLMPVFKNPSDVNLQNGSQFTFFLTAPLSAFCQMVGLSPIEVDKVVYDQAENILANAFAEWEIILCSSTTSLDLVWAQIITDPFLRRLILRFIFCRSAISFYCPPEEREQYLPLCLPHLPTLVAPGSGAVRTAIVQIATHFEVADSFHFSDT 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1361 600 Pfam Protein SCAI 14 550 IPR022709 GO:0003714|GO:0006351
Lele22g1361 600 PANTHER PROTEIN SCAI 4 599 - -
Lele22g1361 600 MobiDBLite consensus disorder prediction 357 383 - -
Lele22g1361 600 MobiDBLite consensus disorder prediction 360 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1361 Lele-ChrLele22 19424133 19429731 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1361 22 19424133 19429731 Lele21g1376 21 22242117 22256098 CCT
Lele22g1361 22 19424133 19429731 Lele22g1366 22 19486207 19493515 CCT
Lele22g1361 22 19424133 19429731 Lele23g0643 23 4908933 4913405 CCT
Lele22g1361 22 19424133 19429731 Lele24g1322 24 19285105 19292346 CCT
Lele22g1361 22 19424133 19429731 Lele22g1361 22 19424133 19429731 ECH
Lele22g1361 22 19424133 19429731 Lele23g0652 23 4984301 4989147 hybridization
Lele22g1361 22 19424133 19429731 Lele24g1318 24 19226746 19235965 hybridization