Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0652 ATGTCTGACAACGACCTTGTCTTCGACACTTTCCGAGCTCTGGTGGAGAGCGCGGACCGCAAGTTCGCTAGGGTTCGCGACGTGCCAGCCTATGGGCGTGTTAGTCAGAACCACTTCTATCTGAAGGTTTTCAAGGCATATACGCGACTTTGGAAGTACCAGCAGGAGAACCGGTCCAAACTGGTTCAGTGCGGTCTAAAACGCTGGGAAATCGGCGAGATCGCTAGCCGAATAGGGCAGCTTTACTTTGGGCAGTATATGAGGACTAGTGAGTGCAGGTACTTGGTTGAAGCATATGTGTTCTATGAAGCGATCCTCAACAGAAGGTATTTTGAAGGATCCGAAGGTTCGCCGAAAGATCCGGGAATTAGGTTCAAGGAATTAAGGTTTTATGCACGGTTTTTGTTGGTGTCGGTGATTTTAAACAGAACGGAGATGGTAAAGCATCTCATGGACCGTTTCATGGCTTTGCTTGACGATTGTAAGAGCAACTTCCGGGAGACTAATTTAAAGGAATGGAGGCAAGTGGTGCAAGAAATTGTCCGATTTACAAAAGCAGAGAATGGCTTTGCTATCAGGCCTTTGCGTTATAGTGCCATAACTGATACTCATCAGGCTTCTCTTCCATATGTAGCTCGTTTCCATGCAAAGAGGGTTTTAAAATTTCGAGATGCCCTGTTGACAAGCTATCATCAGAATGAGGTCAAATTTGCTGATCTTACATTAGACACCTACAGAATGATGCAATGTTTAGAATGGGAGCCTAGTGGATCGTTCTACCAAAAACCTGTTGTTAAACCGCTTGAGAATGGGGACTGCATCGATCATTCGGGAACTTCTGGGTTAATAAATATGAACCTAGCTGCAGATCTGACCGATCCAAATGTGCCTCCTAATCCAAGAAAGGCTGTTCTTTATCGTCCATCTGTAACACATCTGATAGCAGTTATGGCAGCAATTTGCGAGGAACTGCCACCGGATAGTGTTGTGCTTCTATATCTATCTGCTTCAGGGAAGGCTGGTTATAATAATATCCATCAGTTGGAGAATTCTGGAGGGTCATCGAAACATTCGAGGCACAAAGTCCTTTCTCAGGCTTCCCAAGAGAAGAGCAGTGGACCTTCTGACTCGCAAATCAATGGCAAGAGAGAATCCAACTCCTATTATGACAACTATCTGTGGTTTGGTCCCAAGGGCATTGAGGGTTCAAACAATCTTTACCCTGGCGATCTTGTACCTTTCACTCGCAAACCTCTTTTCTTCATTATTGATAGTGATAACAGCCATGCATTCAAGGTTTTACGTGGTGCCCAAAGGGGGGAGACAGCTGCTATTTTTCTTTCACCTTTAATGCCAGTTTTCAAGAATCCATCTGATGTGAATTTGCATAATGGAAGCCAGTTTACCTTCTTCTTGACTGCTCCTTTGTCGGCATTTTGCCAGATGGTTGGCCTTTACCCCAGTGAGGTTGACAAGGATGTCTATAACCAAGCGGAGAACATTCTTGCCAACGCCTTTGCTGAGTGGGAAATAATTTTGTGCTCATCAACTACTAGCTTGGATTTAGTCTGGGCTCAAATCATAACTGATCCATTTTTGCGGCGGCTTATTTTAAGATTCATCTTCTGTCAGTCAGCAATCTCCTTTTACTGCCCGCCCGATGAAAGCGAGCAGTATCTGCCGCTCTGCTTGCCTCCCCTACCCACACTTGTTGCACCGGGTTCTGGAGCTGTTCGTACTGCCGTCGTCCAAATTGCTACACACTTTGAAGTGGCTGACTCCTTTCACTTTAGTGATACCTAA 1803 0.4531 MSDNDLVFDTFRALVESADRKFARVRDVPAYGRVSQNHFYLKVFKAYTRLWKYQQENRSKLVQCGLKRWEIGEIASRIGQLYFGQYMRTSECRYLVEAYVFYEAILNRRYFEGSEGSPKDPGIRFKELRFYARFLLVSVILNRTEMVKHLMDRFMALLDDCKSNFRETNLKEWRQVVQEIVRFTKAENGFAIRPLRYSAITDTHQASLPYVARFHAKRVLKFRDALLTSYHQNEVKFADLTLDTYRMMQCLEWEPSGSFYQKPVVKPLENGDCIDHSGTSGLINMNLAADLTDPNVPPNPRKAVLYRPSVTHLIAVMAAICEELPPDSVVLLYLSASGKAGYNNIHQLENSGGSSKHSRHKVLSQASQEKSSGPSDSQINGKRESNSYYDNYLWFGPKGIEGSNNLYPGDLVPFTRKPLFFIIDSDNSHAFKVLRGAQRGETAAIFLSPLMPVFKNPSDVNLHNGSQFTFFLTAPLSAFCQMVGLYPSEVDKDVYNQAENILANAFAEWEIILCSSTTSLDLVWAQIITDPFLRRLILRFIFCQSAISFYCPPDESEQYLPLCLPPLPTLVAPGSGAVRTAVVQIATHFEVADSFHFSDT 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0652 600 Pfam Protein SCAI 14 550 IPR022709 GO:0003714|GO:0006351
Lele23g0652 600 PANTHER PROTEIN SCAI 4 599 - -
Lele23g0652 600 MobiDBLite consensus disorder prediction 347 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0652 Lele-ChrLele23 4984301 4989147 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0652 23 4984301 4989147 Lele21g1376 21 22242117 22256098 CCT
Lele23g0652 23 4984301 4989147 Lele22g1366 22 19486207 19493515 CCT
Lele23g0652 23 4984301 4989147 Lele23g0643 23 4908933 4913405 CCT
Lele23g0652 23 4984301 4989147 Lele24g1322 24 19285105 19292346 CCT
Lele23g0652 23 4984301 4989147 Lele23g0652 23 4984301 4989147 ECH
Lele21g1371 21 22182459 22187340 Lele23g0652 23 4984301 4989147 hybridization
Lele22g1361 22 19424133 19429731 Lele23g0652 23 4984301 4989147 hybridization