Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1175 ATGGCGAGCTCTCTGTTGTCGGTTTATCGCTTTCTTCCCTCGCGAAAAAAGGAAAATGTGGGATACGTTACTGACATCAAGACATCATTGTGCGGACAACTTGGAAGGAGAGTCAAGAGCAGAGAGACTGTGATTCCCGACCCTGATTACCGAATTCCAATTGTTCTTCTCGGTATAACTGGTGGGTTGGCTTACACAAATAACCTGGGACCTGCTATACCTGTTGGTCTCCTGGGTTTGCTTCTACTAGTCCAGACCACTAGAGTTAGATTCGTTTTTGACGATGAGGCTCTGGATGTAAAGGTAGGTGATGAACTCAAGGAATCAGGTGAAAATGTCTTTGTAGGCGGGAAAAACCGTTGGAAAATGGGAAGCAGCTTTACGATGAAAGAGCTGGCCCTTCCCAAAACAGTGGACCAAAAGAATCCTAAGGAATCAGCTTTTGTATCTGAATCGTATTCATTCTATAGATCCGAGTTTCGTTATATCAGAAAGCGTCCAAGGGCCAACAACAACAGTAACCATTTGCTAATTCATCAATAG 543 0.4401 MASSLLSVYRFLPSRKKENVGYVTDIKTSLCGQLGRRVKSRETVIPDPDYRIPIVLLGITGGLAYTNNLGPAIPVGLLGLLLLVQTTRVRFVFDDEALDVKVGDELKESGENVFVGGKNRWKMGSSFTMKELALPKTVDQKNPKESAFVSESYSFYRSEFRYIRKRPRANNNSNHLLIHQ 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1175 180 PANTHER - 34 133 IPR021467 -
Lele22g1175 180 Pfam Protein of unknown function (DUF3119) 45 124 IPR021467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1175 Lele-ChrLele22 9336903 9340410 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1175 22 9336903 9340410 Lele17g0789 17 19451937 19454039 CCT
Lele22g1175 22 9336903 9340410 Lele18g0733 18 4478102 4481039 CCT
Lele22g1175 22 9336903 9340410 Lele19g0776 19 4563387 4565463 CCT
Lele22g1175 22 9336903 9340410 Lele20g0683 20 14014090 14017070 CCT
Lele22g1175 22 9336903 9340410 Lele22g1175 22 9336903 9340410 ECH
Lele22g1175 22 9336903 9340410 Lele23g0873 23 13834145 13836672 hybridization
Lele22g1175 22 9336903 9340410 Lele24g1148 24 9857246 9863283 hybridization