Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0789 ATGAAATTCGGTAAGAGTCTTAGCAACCAGATCGAGAAAACCCTGCCTGAGTGGCGGGACAAGTTCCTCTCCTACAAGGAGCTCAAGAAGAAGTTGAAGCAGTTGGAGCCTGCCGCTAAGGTTAGCGACGATGGAGGCTCCGACAGGGCCTCCAAACGCCAACGGCTCGACGCCGCCGATTCCAAAGATGGCGTGTCCAAGGAGGAGTGCGACTTCAGGAACTTGCTGGAGAAAGAACTCGAGAAATTCAATAACTTCTTCGTTGAGAAGGAGGAAGAGTACATTATCAAATTGAAGGAGTTACAAGACAGGGTGGCGAAAGTAAAGGATTCTAATGAAGAGCTACTGAAAATTCGCAAAGAAATTGTTGATTTCCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTTAACTATACAGGACTAGTGAAAATACTAAAGAAGTATGATAAGAGAACTGGGGCTCTCATTCGCTTGCCATTCATTCAGAAGGTATTGCAACAGCCATTTTTCACCACTGACCTTCTCTACAAGCTAGTTAAGGAATGCGAGTCGATGCTGGATCGCCTCTTCCCTGCAAATGAACCTGCAGCTTCTGGTGAGGGAACTTCACAAGCAGAAGGGTGTGATCCTTCAACTTCAACTACGACCGAGAGTAACGGTCTGCTGATGCCGAAGGAACTGTCCGAGATCGAGTACATGGAGAGCCTCTACATGAAGAGTACCATATCAGCATTGCATGTTTTACAGGAGATTAGAAGTGGAAGCTCTACAGTTAGCGTGTTTTCACTGCCACCCCTGCAAATGAGTGGATTGGAAGAAAAATGGAAGAAAATACCAGTTCTGGAACAAACCGCTAAGTAA 867 0.4625 MKFGKSLSNQIEKTLPEWRDKFLSYKELKKKLKQLEPAAKVSDDGGSDRASKRQRLDAADSKDGVSKEECDFRNLLEKELEKFNNFFVEKEEEYIIKLKELQDRVAKVKDSNEELLKIRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECESMLDRLFPANEPAASGEGTSQAEGCDPSTSTTTESNGLLMPKELSEIEYMESLYMKSTISALHVLQEIRSGSSTVSVFSLPPLQMSGLEEKWKKIPVLEQTAK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0789 288 Coils Coil 73 118 - -
Lele17g0789 288 MobiDBLite consensus disorder prediction 35 62 - -
Lele17g0789 288 CDD SPX_AtSPX1_like 2 153 - -
Lele17g0789 288 MobiDBLite consensus disorder prediction 199 222 - -
Lele17g0789 288 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 275 IPR031142 GO:0016036
Lele17g0789 288 ProSiteProfiles SPX domain profile. 1 164 IPR004331 -
Lele17g0789 288 MobiDBLite consensus disorder prediction 195 222 - -
Lele17g0789 288 Pfam SPX domain 1 45 IPR004331 -
Lele17g0789 288 Pfam SPX domain 114 166 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0789 Lele-ChrLele17 19451937 19454039 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1170 21 9492976 9495510 Lele17g0789 17 19451937 19454039 CCT
Lele22g1175 22 9336903 9340410 Lele17g0789 17 19451937 19454039 CCT
Lele23g0873 23 13834145 13836672 Lele17g0789 17 19451937 19454039 CCT
Lele24g1148 24 9857246 9863283 Lele17g0789 17 19451937 19454039 CCT
Lele17g0789 17 19451937 19454039 Lele19g0776 19 4563387 4565463 hybridization
Lele17g0789 17 19451937 19454039 Lele20g0683 20 14014090 14017070 hybridization