Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0683 ATGAAATTCGGTAAGAGTCTTACCAACCAGATCGAGAAAACCTTGCCTGCGTGGCGGGACAAGTTCCTCTCCTACAAGGAGCTCAAGAAAAAGTTGAACCAGTTGGAGCCTGCCGCTAAGGTTAGCGACGATGGCGGCTACGACAGGGCCGCCAAACGCCAACGTGTAGACGCCGCCGATTCCAAGGATGGCGTGTCTCAGGAGGAGTGCGACTTCAGGAACTTGTTGGAGAACGAACTCGAGAAATTCAATAACTTCTTCGTTGAGAAGGAGGAAGAGTACATTATCAAATTGAAGGAGTTACAAGACAGGGTGGCGAAAGTAAAGGATTTTAATGAAGAGCTACTGAAAATTCGGAAAGAAATTGTTGATTTCCATGGAGAGATGGTCTTACTGGAAAACTACAGTGCCCTTAACTATACAGGACTAGTGAAAATACTAAAGAAGTATGATAAGAGAACTGGTGCTCTCATTCGTTTGCCCTTCATTCAAAAGGTATTGCAACAGCCATTTTTCACCACTGACCTCCTCTACAAGCTAGTTAAAGAATGCGAGTCAATGCTGGATCGCCTCTTCCCTGCAAATGAACCTGCAGCTTCTGTTGAGGGAACTTCCCAAGAAGAAGGGTGTGATCCTTCAACTTCAACTACGACCAAGAGTATAGGTCTGCTGAAACCGAAGGAACTGTCAGAGATTGAGTACATGGAGAGCCTCTATATGAAGAGCGTCATATCAGCATTGCATGTTTTGCAGGAGATTAGAAGTGGAAGCTCTACAGTTAGCGTGTTTTCGCTGCCACCCCTGCAAATGAGCGGATTGGAAGAAAAATGGAAGAAAATACCAGTTCTGGAACAAACGGCCAAAGTGAGGCTACTGGCTCTGTTGTTGGCAGCTTGTGATGCTGTCTCCTCGGGAAGATATTCTAACCCATCTCACAAGCTCATGATAACACTTGAAATACGGCACAATCATGCTTCATGTTGCTCAGTGTCCGTCTAA 999 0.4555 MKFGKSLTNQIEKTLPAWRDKFLSYKELKKKLNQLEPAAKVSDDGGYDRAAKRQRVDAADSKDGVSQEECDFRNLLENELEKFNNFFVEKEEEYIIKLKELQDRVAKVKDFNEELLKIRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECESMLDRLFPANEPAASVEGTSQEEGCDPSTSTTTKSIGLLKPKELSEIEYMESLYMKSVISALHVLQEIRSGSSTVSVFSLPPLQMSGLEEKWKKIPVLEQTAKVRLLALLLAACDAVSSGRYSNPSHKLMITLEIRHNHASCCSVSV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0683 332 MobiDBLite consensus disorder prediction 199 219 - -
Lele20g0683 332 Coils Coil 98 118 - -
Lele20g0683 332 CDD SPX_AtSPX1_like 2 153 - -
Lele20g0683 332 Pfam SPX domain 117 166 IPR004331 -
Lele20g0683 332 Pfam SPX domain 1 38 IPR004331 -
Lele20g0683 332 MobiDBLite consensus disorder prediction 198 219 - -
Lele20g0683 332 Coils Coil 73 93 - -
Lele20g0683 332 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 275 IPR031142 GO:0016036
Lele20g0683 332 ProSiteProfiles SPX domain profile. 1 164 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0683 Lele-ChrLele20 14014090 14017070 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1170 21 9492976 9495510 Lele20g0683 20 14014090 14017070 CCT
Lele22g1175 22 9336903 9340410 Lele20g0683 20 14014090 14017070 CCT
Lele23g0873 23 13834145 13836672 Lele20g0683 20 14014090 14017070 CCT
Lele24g1148 24 9857246 9863283 Lele20g0683 20 14014090 14017070 CCT
Lele17g0789 17 19451937 19454039 Lele20g0683 20 14014090 14017070 hybridization
Lele18g0733 18 4478102 4481039 Lele20g0683 20 14014090 14017070 hybridization