Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1170 ATGGCGAGCTCTCTGTTGGCGGTTTATCGCTTTCTTCCCTCGCGAAAAAAGGAAAAGGTGGGATACGTTACTGACATTAAAACATCGTTGTGTGGACAAGTACTGTGTAATCCAAATTCTTTGAGAAGACAAACAGCTACTTGCCATGGAAGCCGTCTTGTTGTTTCCGCACTGCTTGGAAGGAGAGTCAAGAGCAGAGAAACTGTGATTCCCGACCCTGATTACCGAATTCCAATTGTTCTTCTCGGTATAACTGGTGGGTTGGCTTATACAAATAACCTGGGACCTGCTATACCTGTTGGTCTCCTCGGTTTGCTTCTGTTAGTCCAGACCACAAGGGTTAGATTCGTTTTTGACGATGAGGCTCTGGAGGTAAAGGTAGGTGAAGAACTCAAGGAATCAGGTGAAAATGTCTTTGTAGGCGGGAAAAACCGTTGGAAGTATTCAACTTTTGTAAATTGGGAGTTGTGGTGGCCTAACTTCCCTATCTTGATGTACTTCAAGGAGACACAAACAAAGCCTGAGGGACAAATTCATTTCTTCCCAGTAATCTTTAATGGGAAGCAACTTTATGATGTTATGGTGGAAAGAGCTGGTCCTTCCCAGAACAGTGGACCAAAAGAAACCTAA 630 0.4397 MASSLLAVYRFLPSRKKEKVGYVTDIKTSLCGQVLCNPNSLRRQTATCHGSRLVVSALLGRRVKSRETVIPDPDYRIPIVLLGITGGLAYTNNLGPAIPVGLLGLLLLVQTTRVRFVFDDEALEVKVGEELKESGENVFVGGKNRWKYSTFVNWELWWPNFPILMYFKETQTKPEGQIHFFPVIFNGKQLYDVMVERAGPSQNSGPKET 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1170 209 Pfam Protein of unknown function (DUF3119) 70 197 IPR021467 -
Lele21g1170 209 PANTHER - 1 207 IPR021467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1170 Lele-ChrLele21 9492976 9495510 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1170 21 9492976 9495510 Lele17g0789 17 19451937 19454039 CCT
Lele21g1170 21 9492976 9495510 Lele18g0733 18 4478102 4481039 CCT
Lele21g1170 21 9492976 9495510 Lele19g0776 19 4563387 4565463 CCT
Lele21g1170 21 9492976 9495510 Lele20g0683 20 14014090 14017070 CCT
Lele21g1170 21 9492976 9495510 Lele21g1170 21 9492976 9495510 ECH
Lele21g1170 21 9492976 9495510 Lele23g0873 23 13834145 13836672 hybridization
Lele21g1170 21 9492976 9495510 Lele24g1148 24 9857246 9863283 hybridization