Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0888 ATGCTGAAAGCTATTCAGATCCTGGGAAGTTCGTCTAGCTTAGTTACTCAACGTTGGAAGCCCTTTAGCGGTCAAGGTCTCCCTTCCATTTCAATCTCTTTCAAACCCTTGTTATCTTTCTGCCCAGTATCCTTCTTGAAAGCACTTCCCACAATGGATTCTTGGCTCCTGCCCAAAGATTCCACTCCTAGGACTCAATCGAGTTTAATCCATGCTTCCTCAGCTCGTTCTGACCCGAATCCAGATGGCACCTCGTCGTCTCCTCCATCATCATCCCTTGCAGTTCAGTTATCCGGAGTTCGAAACATCAAGTACTGTCAGTCTTGTGGTGGTCCTACAAAGCATGATATTCCTGAAGGAGAAGAAAGGTTGAGAGCAATATGTACAATTTGTGGGAAGATTATCTATCAGAATCCAAAAATGGATCAAACAGACCCCTGTCCCCTTAAACCCAATTACAGACCAAAACAGCAACACAGTGCTGTTAACACTCAATGCTAA 501 0.4451 MLKAIQILGSSSSLVTQRWKPFSGQGLPSISISFKPLLSFCPVSFLKALPTMDSWLLPKDSTPRTQSSLIHASSARSDPNPDGTSSSPPSSSLAVQLSGVRNIKYCQSCGGPTKHDIPEGEERLRAICTICGKIIYQNPKMDQTDPCPLKPNYRPKQQHSAVNTQC 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0888 166 Pfam Nudix N-terminal 104 137 IPR029401 -
Lele16g0888 166 MobiDBLite consensus disorder prediction 60 93 - -
Lele16g0888 166 MobiDBLite consensus disorder prediction 146 166 - -
Lele16g0888 166 Gene3D - 101 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0888 Lele-ChrLele16 5013574 5015294 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0794 06 4899165 4901222 Lele16g0888 16 5013574 5015294 CCT
Lele07g0970 07 5805453 5809404 Lele16g0888 16 5013574 5015294 CCT
Lele08g0787 08 4919684 4925753 Lele16g0888 16 5013574 5015294 CCT
Lele13g1556 13 24684782 24686191 Lele16g0888 16 5013574 5015294 hybridization
Lele14g1476 14 23061883 23065811 Lele16g0888 16 5013574 5015294 hybridization