Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0970 ATGCTTGTACCAGCTGGAATAGCATCGAAAATGAGAATAACTGAACAAGGGTTTCATTTTATACAGCGTACGTCGTCAGAAGCAAGCCTGACAGCACTTGTAAAATCAATTGGCCTCTCAGCGGCATCGAGCGACGGTCCTGGCGAAACAGGGTTAACACATTTTGATGTTGGGTTAGCCTCAAGACCGCGACTTGCAGCAACTGAACCCCTCCTGGATCCTGGGCGTCGATTTGCAGCAATGAATAGCGCAATGAAATTGGCACTGGTTAACTCGAAAAACACCTGTATGTCTCTCAGGGCTGCCCTCTTTCATTCCACTCCCGTCTTGGAACGTAAAAGGCGAAACAATTGGGACTCTAGATTCAACCATTATTCAAAAAGATGTAGAAGGATTCATGCTAAACAGACATTATTGCGCAATATGAATGCTTATGCAGACTTCCTGCTTCAGGAAACCCTTGAGAAGAATAGTATGAGCTGGAAGGATGAGATTGATGAGGATGTTCCATCTTCAAGTCAAGGCACCTCATGGTTTAGGAAAGAATACTCTGGCAAGGGCTGTGGAAGGAACAGAAATGGCAATAAAGACTCACGTTATTATCGCAGAAGAAATTCTGATTCTGATTTTCCTGAAGAAGATTTTGATGTTGAAACCATTTTCCGCTCCGCCTTTGGTGGGAACCAATTCTTTTGTTATTCCTTCATCAATGAGGAGCATCCTCAATGGAGGAGGTCAGGACGCTATTCTAACTACAGCAGATCATGGAACTGGAGCGACGATGATGAATATTATGACTCTTCTACCGAGTCTAATAGTTCAGATTCAAATTTAGCTTCTGATAGGTTAGCCCTTGGTTTGAGTGCTCATGGTCCTCTGAAACCTGAAGATGTGAAAAATGCGTACCGGGCCTGTGCCCTGAAGTGGCATCCAGATCGTCATCAAGGCTCTTTCAAGGTAATAGCAGAAGAGAAGTTCAAGGCTTGCAGTGCAGCATACCAATCTTTGTGTGATAAGTTGGCCATAAATTAA 1032 0.439 MLVPAGIASKMRITEQGFHFIQRTSSEASLTALVKSIGLSAASSDGPGETGLTHFDVGLASRPRLAATEPLLDPGRRFAAMNSAMKLALVNSKNTCMSLRAALFHSTPVLERKRRNNWDSRFNHYSKRCRRIHAKQTLLRNMNAYADFLLQETLEKNSMSWKDEIDEDVPSSSQGTSWFRKEYSGKGCGRNRNGNKDSRYYRRRNSDSDFPEEDFDVETIFRSAFGGNQFFCYSFINEEHPQWRRSGRYSNYSRSWNWSDDDEYYDSSTESNSSDSNLASDRLALGLSAHGPLKPEDVKNAYRACALKWHPDRHQGSFKVIAEEKFKACSAAYQSLCDKLAIN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0970 343 MobiDBLite consensus disorder prediction 189 209 - -
Lele07g0970 343 CDD DnaJ 295 338 IPR001623 -
Lele07g0970 343 ProSiteProfiles dnaJ domain profile. 280 341 IPR001623 -
Lele07g0970 343 Gene3D DnaJ domain 285 338 IPR036869 -
Lele07g0970 343 MobiDBLite consensus disorder prediction 192 209 - -
Lele07g0970 343 PRINTS DnaJ domain signature 302 317 IPR001623 -
Lele07g0970 343 PRINTS DnaJ domain signature 321 341 IPR001623 -
Lele07g0970 343 SUPERFAMILY Chaperone J-domain 264 338 IPR036869 -
Lele07g0970 343 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 81 341 - -
Lele07g0970 343 Pfam DnaJ domain 293 339 IPR001623 -
Lele07g0970 343 SMART dnaj_3 279 341 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0970 Lele-ChrLele07 5805453 5809404 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0970 07 5805453 5809404 Lele13g1556 13 24684782 24686191 CCT
Lele07g0970 07 5805453 5809404 Lele14g1476 14 23061883 23065811 CCT
Lele07g0970 07 5805453 5809404 Lele15g0869 15 5032001 5034224 CCT
Lele07g0970 07 5805453 5809404 Lele16g0888 16 5013574 5015294 CCT
Lele07g0970 07 5805453 5809404 Lele07g0970 07 5805453 5809404 ECH
Lele05g0930 05 5726706 5732231 Lele07g0970 07 5805453 5809404 hybridization
Lele06g0794 06 4899165 4901222 Lele07g0970 07 5805453 5809404 hybridization