Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1476 ATGCCCTTAGATATTGCGCTCCTGCTTCTTCTTGTTGGAGCTTTATCGTTTCAACCCAGCTTGGTGCATAACATTCGGTATCCTATGTTGTACCAAGAAACCCCACAAGCTTCTAGCATTGTTAATGAAGTCCTCGTTCTTGGTGAGCATACCCTTCATGCTAAGGAATTTAATGAGTGCATGCATCCAAGTGAAGTAACACTCTTAGGTTTAGAAAAAGCAATGCTGAAAGCCATTCAGATCCTGGGAAGTTCGTCTAGCTTAGTTACTCAACGTTGGAAGCCCTTTAGCGGTCAAGGTCTCCCTTCCATTGCAATCTCTTTCAAACCCTTCTCATCTTTCTGCCCAGTATCTTTCTTGAAAGCACTTCCCCCGATGGATTCTTGGTTCCTGCCCAAAGATTCCACTCCCAGGACTCAATCGAGTTTAATCCATGCTTCGTCAGCTCGTTCTGACCCGAATCCAGATGGCACCTCGTCGTCTCCTCCATCATCGTCCCTTGCAGCTCAGTTATCCGGAGTTCGAAACATCAAGTACTGTCAGTCGTGTGGTGGTCCAACAAAGCATGATATTCCTGAAGGAGAAGAAAGGTTGAGAGCAATATGTACAATTTGTGGGAAGATTATCTATCAGAATCCAAAAATGGTTGTTGGTTGCCTCATACAACATGATAACAAGGTCCTGCTTTGCAAGCGGAAGATTCAACCATCTTACGGTCTTTGGACGCTTCCTGCTGGGTATTTGGAAATTGGAGAGTCAGCTATGGAAGGTGCTATCAGGGAAACAAGGGAGGAAGCAAATGCAGAAGTGGAAGTGCTGTCTCCTTTTGCTCAATTGGACATTCCTCTAATTGGCCAAACTTATATAATCTTCTTAGCAAAGTTAAAGAAGCCCTACTTTTCCCCTGGTCCAGAATCATCAGAATGCCAGCTTTTCTCGCTTGATGATATACCTTTCGATTCTCTGTCTTTTTCATCAATGGTGGTTACCTTAAGTATGTATGCTGAGGATACTAAGGCTGGAAAGCTCAAATTCCATTATGGCACCATTAACAAAAGGCCGGGCACAAGTCCCTCTGATATTCATGCATATACGCTGGATAATCATATGCAGTCATGA 1119 0.4388 MPLDIALLLLLVGALSFQPSLVHNIRYPMLYQETPQASSIVNEVLVLGEHTLHAKEFNECMHPSEVTLLGLEKAMLKAIQILGSSSSLVTQRWKPFSGQGLPSIAISFKPFSSFCPVSFLKALPPMDSWFLPKDSTPRTQSSLIHASSARSDPNPDGTSSSPPSSSLAAQLSGVRNIKYCQSCGGPTKHDIPEGEERLRAICTICGKIIYQNPKMVVGCLIQHDNKVLLCKRKIQPSYGLWTLPAGYLEIGESAMEGAIRETREEANAEVEVLSPFAQLDIPLIGQTYIIFLAKLKKPYFSPGPESSECQLFSLDDIPFDSLSFSSMVVTLSMYAEDTKAGKLKFHYGTINKRPGTSPSDIHAYTLDNHMQS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1476 372 Pfam Nudix N-terminal 178 211 IPR029401 -
Lele14g1476 372 Pfam NUDIX domain 216 317 IPR000086 -
Lele14g1476 372 MobiDBLite consensus disorder prediction 141 167 - -
Lele14g1476 372 SUPERFAMILY Nudix 178 334 IPR015797 -
Lele14g1476 372 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 212 363 - -
Lele14g1476 372 Gene3D - 175 211 - -
Lele14g1476 372 ProSiteProfiles Nudix hydrolase domain profile. 212 335 IPR000086 -
Lele14g1476 372 ProSitePatterns Nudix box signature. 246 267 IPR020084 GO:0016787
Lele14g1476 372 PANTHER NUDIX HYDROLASE 23 179 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1476 Lele-ChrLele14 23061883 23065811 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0794 06 4899165 4901222 Lele14g1476 14 23061883 23065811 CCT
Lele07g0970 07 5805453 5809404 Lele14g1476 14 23061883 23065811 CCT
Lele08g0787 08 4919684 4925753 Lele14g1476 14 23061883 23065811 CCT
Lele14g1476 14 23061883 23065811 Lele15g0869 15 5032001 5034224 hybridization
Lele14g1476 14 23061883 23065811 Lele16g0888 16 5013574 5015294 hybridization