Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0787 ATGGCATTATTGACCATGCTCCGCACTGATGTCTCGTCTCAGGAAGTTGCTGGAGTTTCTTCGCGACATCGAGGCGACTCGGACTGTCCTGGCGAAACAGGGTTAACCCATTTCGATGCTGGGTTAGCCTCAAGACCGCGACTTGCAGCAACTGTACCCCTCCTGGATCCTGGGCATCGATTTGCAGCAATGAATAGAGCTATGAAATCGGCACTGGTTAATTCGAAAAAGACCTATATGTCTCTCAGGGCTTCCCTCTTTCATTCCACTCCTGTCTTGGAACGTAAAAGACGGAATCATTGGGACTCTAAATTCAACCATTATTCAAAAAGATGTACAAGGATTCACGCTAAACAGACATTATTGCGCAATATGAATGCTTATGCAGACTTCCTGCTTCAGAGCTGGAAGGATGGGATTCATGAGGATGATCCATCGTCAAGTCAAGGCACCTCATGGTTTAGGAAAGAATATTCTGGCAGGGGCCGTGGAAGGAATAGAAATGGCAATAAAGAATCACGGTATTCTCGCAGAAGAAGTTCTGATTCTGATTTTCCTGAAGAAGATTTTGATGTTGAAACCATTTTCCGCTCTGCCTTTGGTGGGAACCGATTCTTTTATTATTCCTACATCAATGAAGAGAATCCTCAATGGAGGAGGTCAGGACGCTATTCTAACTACAGCAGATCTTGGAGCTGGAGCGAGGATGACGAATGTTATGACTCTTCTACCGAGTCTAACAGTTCGGATTCAAATTTAGCTTCAGATAGGTTAGCCCTTGGTTTGAGTGCTCATGGTCCTCTGAAACCTGAAGATGTGAAAAATGCCCGATTTTATGATGTCAGGTACCGGGCCTGTGCCATGAAGTGGCATCCAGATCGTCATCAAGGCTCTTCCAAGGTAATAGCAGAAGATAAGTTCAAGGTTTGCAGTGCAGCATACCAATCATTGTGTGATAAGTTGGCCATAAATTAA 975 0.4472 MALLTMLRTDVSSQEVAGVSSRHRGDSDCPGETGLTHFDAGLASRPRLAATVPLLDPGHRFAAMNRAMKSALVNSKKTYMSLRASLFHSTPVLERKRRNHWDSKFNHYSKRCTRIHAKQTLLRNMNAYADFLLQSWKDGIHEDDPSSSQGTSWFRKEYSGRGRGRNRNGNKESRYSRRRSSDSDFPEEDFDVETIFRSAFGGNRFFYYSYINEENPQWRRSGRYSNYSRSWSWSEDDECYDSSTESNSSDSNLASDRLALGLSAHGPLKPEDVKNARFYDVRYRACAMKWHPDRHQGSSKVIAEDKFKVCSAAYQSLCDKLAIN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0787 324 Pfam DnaJ domain 282 320 IPR001623 -
Lele08g0787 324 Gene3D DnaJ domain 268 319 IPR036869 -
Lele08g0787 324 SUPERFAMILY Chaperone J-domain 282 320 IPR036869 -
Lele08g0787 324 SMART dnaj_3 254 322 IPR001623 -
Lele08g0787 324 MobiDBLite consensus disorder prediction 142 186 - -
Lele08g0787 324 MobiDBLite consensus disorder prediction 158 186 - -
Lele08g0787 324 CDD DnaJ 270 319 IPR001623 -
Lele08g0787 324 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 64 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0787 Lele-ChrLele08 4919684 4925753 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0787 08 4919684 4925753 Lele13g1556 13 24684782 24686191 CCT
Lele08g0787 08 4919684 4925753 Lele14g1476 14 23061883 23065811 CCT
Lele08g0787 08 4919684 4925753 Lele15g0869 15 5032001 5034224 CCT
Lele08g0787 08 4919684 4925753 Lele16g0888 16 5013574 5015294 CCT
Lele08g0787 08 4919684 4925753 Lele08g0787 08 4919684 4925753 ECH
Lele05g0930 05 5726706 5732231 Lele08g0787 08 4919684 4925753 hybridization
Lele06g0794 06 4899165 4901222 Lele08g0787 08 4919684 4925753 hybridization