Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0877 ATGGCTAGGTACGGCGAGGGCGATAAGCGCTGGATCGTCGAGGATAGGGCCGACGGCACCAACGTTCACAATTGGCACTGGGCAGAAACTAACTGTCTTGAATGGTCCAGAAACCTCTTCTCCGAGCTTCTCTCTGATCTCACCGTTCTTGATGGCGAGGGCAACTTGTTCATCAAGACCAAGAACGTTGACAAGGTCGATGGCGAAGCCTATGTCAATGTCCGAAGGGGCAAAATAATTCCCGGTTACGAACTCAGTCTCTCTTTGTCTTGGGAAGGAGAAGCCAAGGATTCCGACGGCAAATCTTTGCTCAAGGTCGATGGGACCGTGCAAGTTCCCTATATCTCCGACGAGAATGCCGATGAGGACCCGGAGCTTAAGTTCACTGTCAATGACGAAGGACCCGTTGGCAAGAGGCTCAAGGAGGCCATGATTTCACGGGGTAAACCTTTAATCTTGAACAAAATCAGAGTTTGGATCGAGAGTATGGCGAAAGGCGGACCTGTCAAAGACGACTTGGAACCAAAAAAAGTGACTCAGCAGAATCCAGCTGCCCCAACTTCCGCCGCTGCGCCCAAGAAAGAGGCTGTGGCGGAGAAAAAGGTCAAGAGTGATAGCAAGAAAGGTCGTAAAACAATCACCTTGACGGAGAAGTTCAGTTGTAGAGCAAGGGATTTATATGAGATATTGATGGATGAGAATAGGTGGAAAGGTTTTACGCAGAGCAATGCGAAGATAAGCAAGGAAGTCGGTGGAGAATTTTTCATTTTTAACGGGTCGGTGACGGGAACAAATGTGGAATTACAGGAAGCTAAACTGATTGTGCAGAAATGGAGGTTCGGGAACTGGCCTGATGGGATTCATTCTACTGTTAGACTTGTGTTTGAGGAACCTGAACCAGGGGTTACGATCATCAAGCTGACACATTCTGATGTGCCCGAGGAAGACTGCTATGGGAATGCCACTGTGGTGGAGAACACGGAGAGAGGATGGCGGGATCTCATTTTCCAAAGGATACGGGCAGTTTTTGGTTTTGGACTTTAA 1044 0.4866 MARYGEGDKRWIVEDRADGTNVHNWHWAETNCLEWSRNLFSELLSDLTVLDGEGNLFIKTKNVDKVDGEAYVNVRRGKIIPGYELSLSLSWEGEAKDSDGKSLLKVDGTVQVPYISDENADEDPELKFTVNDEGPVGKRLKEAMISRGKPLILNKIRVWIESMAKGGPVKDDLEPKKVTQQNPAAPTSAAAPKKEAVAEKKVKSDSKKGRKTITLTEKFSCRARDLYEILMDENRWKGFTQSNAKISKEVGGEFFIFNGSVTGTNVELQEAKLIVQKWRFGNWPDGIHSTVRLVFEEPEPGVTIIKLTHSDVPEEDCYGNATVVENTERGWRDLIFQRIRAVFGFGL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0877 347 MobiDBLite consensus disorder prediction 170 203 - -
Lele16g0877 347 CDD SRPBCC_Aha1 212 345 - -
Lele16g0877 347 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Lele16g0877 347 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 2 164 IPR039981 GO:0001671|GO:0051879
Lele16g0877 347 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
Lele16g0877 347 Gene3D - 210 346 IPR023393 -
Lele16g0877 347 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Lele16g0877 347 Pfam Activator of Hsp90 ATPase homolog 1-like protein 223 343 IPR013538 -
Lele16g0877 347 Gene3D - 18 172 IPR036338 -
Lele16g0877 347 SUPERFAMILY Bet v1-like 212 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0877 Lele-ChrLele16 4946692 4947923 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0807 06 4953944 4960077 Lele16g0877 16 4946692 4947923 CCT
Lele07g0978 07 5873592 5874729 Lele16g0877 16 4946692 4947923 CCT
Lele08g0795 08 4980359 4981522 Lele16g0877 16 4946692 4947923 CCT
Lele05g0941 05 5792633 5794022 Lele16g0877 16 4946692 4947923 CCT
Lele13g1564 13 24738013 24739245 Lele16g0877 16 4946692 4947923 hybridization
Lele14g1487 14 23120613 23121844 Lele16g0877 16 4946692 4947923 hybridization