Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0807 ATGTCTGCGACAGCGGCTTGTTCACATATAATCTGCAGAGAGAATTACCAGCATCAGTGGTTGATCAGTGCGGGAGGAACAAATTCGTTCTCGTTTAAGACTACGACTGGGAATAGTTGGACTGAACGCAGAAAGAAGGAAGGAGAAGGGAAGAGAATAGGAAGGAGGAATGTGCGACTAGAAGCTCTTTGGCCAGATTTGTCAAGACCCACCGTAATTGAGATGGAACCCATCACAGATTCTGATCATCTCGATCAAATCCTTCTAAACGCTCAGCAAAATTCCCAGCCCATTCTCATCGATTGGATGGCTGCTTGGTGCCGGAAAAGTATATATTTGAAGCCCAAGTTGGAAAAGCTGGCTGCTGAGTATCATAATAAGCTCAAATTTTATTGTGTGGATGTAAATAAAGTACCTCAACCGCTAGTCAAGCGCAGTAACATCTCTCTGTGGAAAGACGGAGAGATGAAAGCAGAAGTGATTGGTGGACACAAGGCCTGGATGGTGATTGAAGAAGTGAGAGAAATGATCCGAAAGATAAAATCTCTCAAGACAATTGCGACAAGAATAAACTACTGTGAACTGCCAAGGCACCTATCTCCTCTCAATTATCTTGTTTCCCTCATTTCTCATACACTTGACAACAATAGTATTAGAGGGATCCTTAATCTTGTAAACGATCAAGAGCATTCACATGTTTGGGATGTGTCGAATCGTTTGCTGATTCGACGGGCAGCATCGATACTGACAAAAAAACTCTTTACTTCGATCTTCATATTGGGGTTGCTCTACGCAACTTCCGGAGCTCTTGATATTGGAGGTTACATTAATGTGGACTAG 840 0.4286 MSATAACSHIICRENYQHQWLISAGGTNSFSFKTTTGNSWTERRKKEGEGKRIGRRNVRLEALWPDLSRPTVIEMEPITDSDHLDQILLNAQQNSQPILIDWMAAWCRKSIYLKPKLEKLAAEYHNKLKFYCVDVNKVPQPLVKRSNISLWKDGEMKAEVIGGHKAWMVIEEVREMIRKIKSLKTIATRINYCELPRHLSPLNYLVSLISHTLDNNSIRGILNLVNDQEHSHVWDVSNRLLIRRAASILTKKLFTSIFILGLLYATSGALDIGGYINVD 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0807 279 ProSiteProfiles Thioredoxin domain profile. 58 182 IPR013766 -
Lele06g0807 279 Pfam Thioredoxin 92 162 IPR013766 -
Lele06g0807 279 Gene3D Glutaredoxin 72 180 - -
Lele06g0807 279 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 33 181 IPR044253 GO:0009570
Lele06g0807 279 CDD TRX_family 88 177 - -
Lele06g0807 279 SUPERFAMILY Thioredoxin-like 74 181 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0807 Lele-ChrLele06 4953944 4960077 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0807 06 4953944 4960077 Lele13g1564 13 24738013 24739245 CCT
Lele06g0807 06 4953944 4960077 Lele14g1487 14 23120613 23121844 CCT
Lele06g0807 06 4953944 4960077 Lele15g0859 15 4986067 4987298 CCT
Lele06g0807 06 4953944 4960077 Lele16g0877 16 4946692 4947923 CCT
Lele06g0807 06 4953944 4960077 Lele06g0807 06 4953944 4960077 ECH
Lele06g0807 06 4953944 4960077 Lele07g0978 07 5873592 5874729 hybridization
Lele06g0807 06 4953944 4960077 Lele08g0795 08 4980359 4981522 hybridization