Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0795 ATGTCTGCGATAGCGGCTTGTTCAAATATAATCTGCAGAGAGAATTACCAGCATCAGTGGTTGATCAGTGCCGGAGGAACAAATTCGTTCTCGTTTAAGACTACGACTGGGAATAGTTGGACTGAACGCAGAAAGAAGGAAGGAGAAGGGAGGAGAATAGGAAGGAGGAATGTGCGACTAGGAGCGCTTTGGCCAGATTTGTCAAGACCCACCGAAATTGAGATGGAACCCATCACAGATTCTGATCATCTGGATCAAATCCTTCTAAACGCTCAGCAAAATTCCCAGCCCATTCTCATCGATTGGATGGCTGCTTGGTGCCGGAAATGTATATATTTGAAGCCCAAGTTGGAAAAGCTGGCTGCTGAGTATCATAATAAGCTCAAATTTTATTGTGTGGATGTTAATAAAGTACCTCAACCGCTAGTCAAGCGCGGTAACATCTCTAAAATGCCAACAATTCAGCTGTGGAAAGACGGAGAGATGAAAGCAGAAGTGATTGGTGGACACAAGGCCTGGATGGTGATTGAAGAAGTGAGAGAAATGATCCGAAACTGTGCATATCAAGTACAAGCCTTGCAATAG 585 0.4427 MSAIAACSNIICRENYQHQWLISAGGTNSFSFKTTTGNSWTERRKKEGEGRRIGRRNVRLGALWPDLSRPTEIEMEPITDSDHLDQILLNAQQNSQPILIDWMAAWCRKCIYLKPKLEKLAAEYHNKLKFYCVDVNKVPQPLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWMVIEEVREMIRNCAYQVQALQ 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0795 194 FunFam Thioredoxin 71 188 - -
Lele08g0795 194 ProSiteProfiles Thioredoxin domain profile. 58 188 IPR013766 -
Lele08g0795 194 CDD TRX_family 88 183 - -
Lele08g0795 194 Pfam Thioredoxin 92 173 IPR013766 -
Lele08g0795 194 Gene3D Glutaredoxin 72 184 - -
Lele08g0795 194 SUPERFAMILY Thioredoxin-like 74 183 IPR036249 -
Lele08g0795 194 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 34 186 IPR044253 GO:0009570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0795 Lele-ChrLele08 4980359 4981522 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0795 08 4980359 4981522 Lele13g1564 13 24738013 24739245 CCT
Lele08g0795 08 4980359 4981522 Lele14g1487 14 23120613 23121844 CCT
Lele08g0795 08 4980359 4981522 Lele15g0859 15 4986067 4987298 CCT
Lele08g0795 08 4980359 4981522 Lele16g0877 16 4946692 4947923 CCT
Lele08g0795 08 4980359 4981522 Lele08g0795 08 4980359 4981522 ECH
Lele05g0940 05 5789913 5791025 Lele08g0795 08 4980359 4981522 hybridization
Lele06g0807 06 4953944 4960077 Lele08g0795 08 4980359 4981522 hybridization