Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1564 ATGGCTAGGTATGGCGAGGGCGACAAGCGCTGGATCGTTGAGGATAGGGCCGACGGCACCAACGTTCACAATTGGCACTGGGCGGAGACCAACTGTCTCGAATGGTCCAGAAACCTCTTCTCCAAGCTTCTCTGCGAACTCACCGTTCTTGATGGCGAGGACAACTTGTTCATCAACACCAAGAACGTCGACAAGGTCGATGGCGAAGCCTATGTCAATGTCCGAAAGGGCAAAATCATTCCCGGTTACGAACTCAGTCTCTCTTTGTCTTGGGAAGGAGAAGCCAAGGATTCCGACGGCAAATCTTTGCTTAAGGTCGATGGGACCGTGCAAGTTCCCTATATCTCCGACGAGAATGCCGATGAGGACCCTGAGCTTAAGTTCACTGTCAATGACGAAGGGCCCGTTGGCAAGAGGCTCAAGGAGGCCATGATTTCACGGGGTAAACCTTTAATCTTGGACAAAATCAGGGTTTGGGTCGAGAGCATGGCGAAAGGTGGACCTGTCAAAGACGACTTGGAACCCAAAAAAGTGACTCAGCAGAATCCAGCTGCCTCAACTTCCGCCGCTGCGCCCAAGAAAGAGGCTGTCGCGGAGAAAAAGTCCAAGAGTGATAGCAAGAAAGGTCGTAAAACAATCACCTTGACGGAGAAGTTCAGTTGTAGAGCAAGGGATTTATATGAGATATTGATGGATGATAATAGGTGGAAAGGTTTTACGCAGAGCAATGCGAAGATAAGCAAGGATGTTGGTGGAGAATTTTTCATTTTTAACGGGTCGGTGACCGGAACCAATGTGGAATTACAGGAAGCTAAACTGATTGTGCAGAAATGGAGGTTTGGGAACTGGCCTGATGGGATTCGTTCTACGGTTAGACTTGTGTTTGAGGAACCTGAACCAGGGGTTACGATCATCAAGCTGACACATTCTGATGTACCCGAGGAAGACTGCTACGGGAATGCCACTGTGGTGGAGAACACCGAGAGAGGATGGCGGGATCTCATTTTCCAAAGGATACGGGCAGTTTTTGGTTTTGGACTTTAA 1044 0.4914 MARYGEGDKRWIVEDRADGTNVHNWHWAETNCLEWSRNLFSKLLCELTVLDGEDNLFINTKNVDKVDGEAYVNVRKGKIIPGYELSLSLSWEGEAKDSDGKSLLKVDGTVQVPYISDENADEDPELKFTVNDEGPVGKRLKEAMISRGKPLILDKIRVWVESMAKGGPVKDDLEPKKVTQQNPAASTSAAAPKKEAVAEKKSKSDSKKGRKTITLTEKFSCRARDLYEILMDDNRWKGFTQSNAKISKDVGGEFFIFNGSVTGTNVELQEAKLIVQKWRFGNWPDGIRSTVRLVFEEPEPGVTIIKLTHSDVPEEDCYGNATVVENTERGWRDLIFQRIRAVFGFGL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1564 347 CDD SRPBCC_Aha1 212 345 - -
Lele13g1564 347 MobiDBLite consensus disorder prediction 169 209 - -
Lele13g1564 347 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Lele13g1564 347 MobiDBLite consensus disorder prediction 194 209 - -
Lele13g1564 347 Pfam Activator of Hsp90 ATPase homolog 1-like protein 224 343 IPR013538 -
Lele13g1564 347 Gene3D - 210 346 IPR023393 -
Lele13g1564 347 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 2 164 IPR039981 GO:0001671|GO:0051879
Lele13g1564 347 Gene3D - 18 173 IPR036338 -
Lele13g1564 347 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Lele13g1564 347 SUPERFAMILY Bet v1-like 212 346 - -
Lele13g1564 347 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1564 Lele-ChrLele13 24738013 24739245 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0807 06 4953944 4960077 Lele13g1564 13 24738013 24739245 CCT
Lele07g0978 07 5873592 5874729 Lele13g1564 13 24738013 24739245 CCT
Lele08g0795 08 4980359 4981522 Lele13g1564 13 24738013 24739245 CCT
Lele05g0941 05 5792633 5794022 Lele13g1564 13 24738013 24739245 CCT
Lele13g1564 13 24738013 24739245 Lele15g0859 15 4986067 4987298 hybridization
Lele13g1564 13 24738013 24739245 Lele16g0877 16 4946692 4947923 hybridization