Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1173 ATGGAGGAAGCGCTGGAACTTGCGCGCACTAAGGACACCAAGGAGAGGATGGCCGGGGTGGAGCGCCTTCATCAACTTCTGGAAGCTTCCAGAAAGAGCCTCACTTCTTCTGAGGTTACATCCCTCGTCGATGTTTGCTTGGATCTCTTGAAAGACAACAACTTTCGGGTCTCTCAGGGTGCACTTCAATCTTTGGCCTCTGCTGCTGTGCTCTCTGGCGAGCATTTCAAACTTCATTTCAATGCGCTTGTTCCAGCCGTTGTTGATCGCTTAGGGGATGCCAAGCAACCAGTCCGTGACGCCGCCAGAAGACTCTTGCTTACTCTAATGGAGGTGTCTTCTCCCACAATAATTGTGGAAAGAGCTGGTTCCTTTGCCTGGACACATAAAAGCTGGAGAGTCAGAGAGGAGTTTGCACGGACTGTCACCTCTGCAATTGGTCTATTTGCATCTACTGAGCTTACCCTTCAACGGGTTATTCTTCCTCCAATTTTGCAGTTGCTCAATGATCCAAACCCTGGTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCTCAAGCTGGACCACAATTTCGTGATGAACTTCAGCGTCACAATCTTCCATCATCTATGGTTAAAGATATTAATGCCAGGCTTGAGGGCATTCAGCCAAAAGTTCGCTCTTCAGATGGTATTGGAAGTGGTTTTATTGCTGGGGAAATTAAGCCTTTGAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAGAAGTTCATCAAGGGAGACATCGCTTTTTGGAGGAGAAGGTGATCCCACAGAGAGACCCATTGATCCCATCAAGGTTTATTCAGAAAAGGAGTTAATCAGGGAAATGGAAAAGATTGCATCAACCCTTGTGCCAGAAAAGGACTGGTCAATTCGAATTGGTGCCATGCAAAGAATTGAAGGTCTTGTTTTGGGAGGTGCTGCTGACTATCCATCTTTCCGGGGACTCTTGAAGCAACTTGTTGGACCTTTAAGTGTGCAATTATCGGATAGAAGATCTAGCATTGTGAAGCAGGCTTGCCATCTATTATGCTTTTTGTCAAAGGAACTCTTGGGTGATTTCGAACAATGTGCTGAAATGTTCATACCGGTCCTTTTCAAGCTGGTTGTGATTACTGTACTTGTGATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGTTGCGTAATTGTAAAGTTGCTCGTGTGCTTCCTCGTATAGCTGATTGTGCAAAAAATGATCGCAGTGCTATACTTCGTGCCAGGTGTTGTGAATATGCTCTTTTGATATTAGAACATTGGCCTGATGCTCCAGAAATACATCGATCAGCTGATTTATATGAGGATTTGATAAAGTGTTGTGTATCAGATGCAATGAGTGAGGTTCGGTCAACTGCACGGATGTGCTATAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCCCGCCGCCTATTTTCATCCTTTGATCCTGTTATTCAAAGGTTGATAAATGAAGAGGATGGAGGAATACATAGGCGGCATGCCTCGCCTTCTGTTCGTGATAGAGGTGCATTGCTGTCATTAAGTAGTCAAGCCTCTGCTCCCTCAAGTCTACCTGGATATGGGACTTCTGCTATTGTTGCAATGGATAGAAGTTCAAGTTTATCATCAGGGGCATCTGTTTCTGCTGGTATTACTCAGGCAAAGTCACTTGGCAAAGGTACAGAGCGTAGCTTGGAAAGCGTGTTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGTATGCTTAGAGGTCTGGATTTATCTGATAAGCATAATTCATCAGCCCTCCGCTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCGTCTCGTGATCCACCATTCCCTGCTGCTGTCCCAGCATCTAATCACTTGACAAACTCTCTGCCTACAGAATCAACTGCTTCTGGTGTCAATAAAGGTACTAATCGAAATGGTTTAGGTTTGTCTGATATAATCACTCAAATTCAAGCTTCCAAAGATTCTAGCAAGTTATCATATCATAGTAATGTTACTACGGAGCCTTTATCAGCACTTTCATCATACTCCAGTAGAAGGGCTTCTGAAAGGCTTCAAGATAGAAGCTCTATTGATGACAACAGTGACATTAGGGAGGCTAGGCGGTTTATGAACCCCCACATTGATAGGCAGTATATGGATGCAATTTATAAAGATGGAAACTTAAGGGATTCACATAATATTCATGTGCCTAATTTCCAGCGACCATTGCTGAGGAAAAATGTAGCTGGGCGAATGTCTGTTGGAAGGAGGAGGAGTTTTGATGATAGCCAACTACCCCTTGGAGATTCGTCCAATTATACAGATGGACCAGCATCTCTTCATGAAGCCTTGAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCTTTTAATTATCTTCACTCATTGTTACAGCAAGGTCCAAAGGGAATTCAAGAGGTAGTGCAGAATTTTGAGAAGGTAATGAAGCTTTTTTTTCAGCACTTGGATGATCCACACCATAAAGTTGCACAGGCTGCTCTTTCAACACTTGCAGATATTATTCCAGCATGCCGAAAGCCCTTTGAGAGTTACATGGAAAGGATATTACCTCATGTGTTTTCTCGGTTAATTGACCCTAAAGAACTTGTTAGGCAGTCGAGCTCAATGACTTTGGAAGTTGTTAGCAAAACTTACAGTGTAGATTCTCTCTTACCTGCATTGCTCCGCTCACTTGATGAACAGAGGTCTCCTAAAGCAAAGTTGGCTGTTATTGAATACGCAATCGGCTCCTTTAACAAGCATTCAATGAATCCTGAAGGTGCTGCTAATGCTGGCATCCTGAAATTATGGCTTGCCAAATTAGCACCATTGGCTCATGACAAAAATACAAAGCTCAAAGAAGCAGCAATTACATGCGTTATATCAGTGTATTCTCACTTTGATTCTACTGCAGTCCTGAATTTCATCCTTAGTCTGTCAGTTGAAGAGCAAAATGTGTTGAGGCGAGCCCTTAAACAGTACACTCCTCGCATTGAAGTAGACTTGATAAACTTTTTACAGAGCAAGAAAGATAGGCAGCGCTCTAAGTCTTCCTATGATCTATCTGATGTTGTTGGAACATCCTCAGAAGAGGGGTATGTTGGTGTTTCTAGGAAAGCTCACTACCTTGGAAGGTATTCTGCTGGTTCCCTGGATGGTGATGGTGGTAGGAAGTGGAGTTCCCAAGACTCGACCCTTGTTAAACCCAGCCTTGGCCAAGCAGCTTCTGGTGAAATTCAGGATTTTTTACATCAGAATCATGAGACTGATTTTAATAAGGGTAGTCTTGGTTCAAAAACTAAGGATCTTGCATCCTCAGTCAATCCATTAAGCGAAAATGTTGGCCATCAAACTAGTCAACTTGGGCATCTGGACAGTAGCATTAACTTTGAGGGTCTTTCAACTCCTCGTCTGGATGTGAATGGTCTGATGTCTGTAGAAAATTCAGATGTTACTGAAAGTTTTGGAGAGGATAAAGAACATCCTTCTGAATTGGACCATAATCATCACTTCGCTGAAACTATGAATATTAATTCTTTGGCCGACACAGGTCCCAGCATTCCTCAAATTCTTCATATGGTATGCAGTGGCGGTGATGGGAGCTCAGTTTCAAGCAAGAGGACTGCACTTCAGCAGTTGGTTGAAGCCTCTAGAGCAAATGATCATTCTATTTGGACTAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTACTCTATCATTAATAGTTGAAATGCTCAAGAACCAGAAAGATGCCATGGAAGATTCAGTCGAAATTGTAATTGAGAAGTTGCTTCATGTTACTAAGGATATTGATCCCAAGGTCTCAAATACAGCAGAGCACTGCCTGACCATTGTTTTATCTCAATATGATCCATTCAGATGTTTGAGTGTTATTGTCCCTTTACTGGTTTCTGAGGATGAGAAAACTCTCGTCACTTGCATAAACTGCTTGACAAAGCTTTTGTGCCGACTCTCTCAGGAGGAATTGATGGCTCAGTTACCTTCATTTTTGCCGGCGCTTTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGCAAGACGGTTGTGTTCTGTCTGGTGGATATATATATAATGCTGGGGAAAGCATTCTTGCCATACTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATTTCTCAAGCCAGGACAGGAGTGGCCATTGATGCCACCCAGGAGTAA 4332 0.4314 MEEALELARTKDTKERMAGVERLHQLLEASRKSLTSSEVTSLVDVCLDLLKDNNFRVSQGALQSLASAAVLSGEHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTHKSWRVREEFARTVTSAIGLFASTELTLQRVILPPILQLLNDPNPGVREAAILCIEEMYAQAGPQFRDELQRHNLPSSMVKDINARLEGIQPKVRSSDGIGSGFIAGEIKPLSVNPKKSSPKARSSSRETSLFGGEGDPTERPIDPIKVYSEKELIREMEKIASTLVPEKDWSIRIGAMQRIEGLVLGGAADYPSFRGLLKQLVGPLSVQLSDRRSSIVKQACHLLCFLSKELLGDFEQCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRSAILRARCCEYALLILEHWPDAPEIHRSADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSVRDRGALLSLSSQASAPSSLPGYGTSAIVAMDRSSSLSSGASVSAGITQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLSDKHNSSALRSSSLDLGVDPPSSRDPPFPAAVPASNHLTNSLPTESTASGVNKGTNRNGLGLSDIITQIQASKDSSKLSYHSNVTTEPLSALSSYSSRRASERLQDRSSIDDNSDIREARRFMNPHIDRQYMDAIYKDGNLRDSHNIHVPNFQRPLLRKNVAGRMSVGRRRSFDDSQLPLGDSSNYTDGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIIPACRKPFESYMERILPHVFSRLIDPKELVRQSSSMTLEVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEYAIGSFNKHSMNPEGAANAGILKLWLAKLAPLAHDKNTKLKEAAITCVISVYSHFDSTAVLNFILSLSVEEQNVLRRALKQYTPRIEVDLINFLQSKKDRQRSKSSYDLSDVVGTSSEEGYVGVSRKAHYLGRYSAGSLDGDGGRKWSSQDSTLVKPSLGQAASGEIQDFLHQNHETDFNKGSLGSKTKDLASSVNPLSENVGHQTSQLGHLDSSINFEGLSTPRLDVNGLMSVENSDVTESFGEDKEHPSELDHNHHFAETMNINSLADTGPSIPQILHMVCSGGDGSSVSSKRTALQQLVEASRANDHSIWTKYFNQILTVVLEVLDDSDSSIRELTLSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDIDPKVSNTAEHCLTIVLSQYDPFRCLSVIVPLLVSEDEKTLVTCINCLTKLLCRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGVAIDATQE 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1173 1443 MobiDBLite consensus disorder prediction 603 656 - -
Lele06g1173 1443 Pfam CLASP N terminal 284 500 IPR024395 -
Lele06g1173 1443 Pfam CLASP N terminal 800 994 IPR024395 -
Lele06g1173 1443 SMART TOG_3 3 224 IPR034085 -
Lele06g1173 1443 SMART TOG_3 1199 1435 IPR034085 -
Lele06g1173 1443 SMART TOG_3 282 514 IPR034085 -
Lele06g1173 1443 SMART TOG_3 778 1027 IPR034085 -
Lele06g1173 1443 MobiDBLite consensus disorder prediction 603 617 - -
Lele06g1173 1443 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Lele06g1173 1443 MobiDBLite consensus disorder prediction 633 656 - -
Lele06g1173 1443 Gene3D - 1224 1433 IPR011989 -
Lele06g1173 1443 Gene3D - 1 221 IPR011989 -
Lele06g1173 1443 MobiDBLite consensus disorder prediction 246 261 - -
Lele06g1173 1443 SUPERFAMILY ARM repeat 5 402 IPR016024 -
Lele06g1173 1443 Gene3D - 794 1018 IPR011989 -
Lele06g1173 1443 Gene3D - 267 506 IPR011989 -
Lele06g1173 1443 SUPERFAMILY ARM repeat 290 1433 IPR016024 -
Lele06g1173 1443 Coils Coil 1279 1299 - -
Lele06g1173 1443 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Lele06g1173 1443 MobiDBLite consensus disorder prediction 243 272 - -
Lele06g1173 1443 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Lele06g1173 1443 FunFam Protein peg1 266 513 - -
Lele06g1173 1443 PANTHER CLASP 32 1429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1173 Lele-ChrLele06 7301296 7312210 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1870 13 26553009 26554461 Lele06g1173 06 7301296 7312210 CCT
Lele14g1810 14 24910225 24911705 Lele06g1173 06 7301296 7312210 CCT
Lele15g0539 15 3180114 3181565 Lele06g1173 06 7301296 7312210 CCT
Lele16g0552 16 3107376 3109009 Lele06g1173 06 7301296 7312210 CCT
Lele06g1173 06 7301296 7312210 Lele06g1173 06 7301296 7312210 ECH
Lele06g1173 06 7301296 7312210 Lele07g1361 07 8218701 8231212 hybridization
Lele06g1173 06 7301296 7312210 Lele08g1165 08 7297479 7308437 hybridization