Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0384 ATGGAGAGAGTAAGAGATTTGGCTTCAAACAGGGCTGCCGTAATATTCACAAAGAGCTCATGCTGCATGTGCCACAGCATCAAGCAACTGTTCTACGAGATGGGAGCGAGCCCAGCAGTGCACGAGCTGGACACTGATGCGTATGGGAGAGAAATGGAAAAGGCTTTGAGAGGGATGGGTTGTAACCCTTCGGTTCCAGCAGTGTTCATTGGAGGGAAATTCGTGGGCTCGGCCAAAGATATCATATCCCTCCACGTCGATGGTTCCCTCAAACAGATGCTCATAAATGCCAAGGCCATTTGGTTTTAG 309 0.4951 MERVRDLASNRAAVIFTKSSCCMCHSIKQLFYEMGASPAVHELDTDAYGREMEKALRGMGCNPSVPAVFIGGKFVGSAKDIISLHVDGSLKQMLINAKAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0384 102 Pfam Glutaredoxin 14 75 IPR002109 -
Lele16g0384 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Lele16g0384 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Lele16g0384 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Lele16g0384 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Lele16g0384 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Lele16g0384 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Lele16g0384 102 Gene3D Glutaredoxin 1 101 - -
Lele16g0384 102 CDD GRX_GRXh_1_2_like 12 93 - -
Lele16g0384 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0384 Lele-ChrLele16 2107526 2107834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0384 1 102 Miscellaneous Gene Families AT4G15690 49.020 3.93e-36 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1405 06 9053301 9053609 Lele16g0384 16 2107526 2107834 CCT
Lele07g1616 07 9999612 10001830 Lele16g0384 16 2107526 2107834 CCT
Lele08g1404 08 8999385 8999942 Lele16g0384 16 2107526 2107834 CCT
Lele16g0384 16 2107526 2107834 Lele16g0384 16 2107526 2107834 ECH
Lele13g2042 13 27586790 27587098 Lele16g0384 16 2107526 2107834 hybridization
Lele14g1974 14 25923553 25923861 Lele16g0384 16 2107526 2107834 hybridization