Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1616 ATGTTGACATTCATTCCCCTGAATAATTTGGTGCTTTCCATGCTCACAGATGATGTCAAAGAACCCACCAAGCAAGAGTGGGACATTGATGTGTTGGATAAACTCTATCTTTGTCGGAAAGATGAGCCACGCAACCCACAGAACCATTCATCAGAACGTGCTACAGAGAGGAAGAAGAAGCTAGCTAGATGCTCCGAACTTGGCCGAAAGGAAAACCAGAAACCAGAAGCTATGGATAGAGTGAGGGATTTGGCATCAAAGAAAGCAGCAGTGATATTCACAAAGAGCTCGTGTTACATGAGCCACAGCATTAAGCAGCTGTTCTACGAGCAAGGAGCGAGCCCTGCAGTTCATGAGCTTGACAAGGACCCATATGGCAGAGAAATGGAATTGGCTTTAAGGTCTCTGGGTTGTAGCCCTTCAGTCCCTGCGGTGTTCATTGGAGGCAAGTTCGTTGGTTCTGCAAGAGATATCATTTCTCTTCATGTTGATGGCACTCTCAAGCAAATGCTCATTGATGCTAGGGCCATATGGTTTTAG 540 0.4593 MLTFIPLNNLVLSMLTDDVKEPTKQEWDIDVLDKLYLCRKDEPRNPQNHSSERATERKKKLARCSELGRKENQKPEAMDRVRDLASKKAAVIFTKSSCYMSHSIKQLFYEQGASPAVHELDKDPYGREMELALRSLGCSPSVPAVFIGGKFVGSARDIISLHVDGTLKQMLIDARAIWF 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1616 179 MobiDBLite consensus disorder prediction 41 80 - -
Lele07g1616 179 TIGRFAM GlrX-like_plant: glutaredoxin-like family 81 178 IPR011905 -
Lele07g1616 179 Gene3D Glutaredoxin 70 177 - -
Lele07g1616 179 CDD GRX_GRXh_1_2_like 89 170 - -
Lele07g1616 179 ProSiteProfiles Glutaredoxin domain profile. 78 178 - -
Lele07g1616 179 Pfam Glutaredoxin 91 152 IPR002109 -
Lele07g1616 179 PANTHER GLUTAREDOXIN 78 178 IPR011905 -
Lele07g1616 179 SUPERFAMILY Thioredoxin-like 78 178 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1616 Lele-ChrLele07 9999612 10001830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1616 78 179 Miscellaneous Gene Families AT4G15690 50.000 4.55e-34 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1616 07 9999612 10001830 Lele13g2042 13 27586790 27587098 CCT
Lele07g1616 07 9999612 10001830 Lele14g1974 14 25923553 25923861 CCT
Lele07g1616 07 9999612 10001830 Lele15g0365 15 2091584 2091886 CCT
Lele07g1616 07 9999612 10001830 Lele16g0384 16 2107526 2107834 CCT
Lele07g1616 07 9999612 10001830 Lele07g1616 07 9999612 10001830 ECH
Lele05g1560 05 9996112 9996420 Lele07g1616 07 9999612 10001830 hybridization
Lele06g1405 06 9053301 9053609 Lele07g1616 07 9999612 10001830 hybridization