Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1404 ATGCTTAAAGCATCAACTTGTTCATTCCCGGGGTCACCATGTTCAATTCTTTGGGAGCATTCCAATTATCCAAATTCCAAAGCTACTTCTCTCTCTCTATCTCTCAACCATTACTTAATGCCATCCACTTACCAGCCCTATAAATACGTGGCATACCCTTGTCAAAGTCCAACACAGAGAAAAACACTCACCAATCAAGTTTCATACACATATATATCATTCTGCAGAAAAACTAGAAAACCAGAAGCTATGGATAGAGTGAGGGATTTGGCATCAAAGAAAGCTGCAGTGATATTCACGAAGAGCTCGTGTTACATGAGCCACAGCATTAAGCAGCTGTTCTACGAGCTAGGAGCAAGCCCTGCAGTTCATGAGCTTGACAAGGACCCCTATGGCAGAGAAATGGAGTTGGCTTTAAGGTCTCTGGGTTGTAGCCCTTCAGTCCCTGCGGTGTTCATCGGAGGCAAGTTCGTTGGTTCTGCAAGAGATATCATTTCTCTTCATGTTGATGGCACTCTCAAGCAAATGCTCATTGACGCTAGGGCCATATGGTTTTAG 558 0.4391 MLKASTCSFPGSPCSILWEHSNYPNSKATSLSLSLNHYLMPSTYQPYKYVAYPCQSPTQRKTLTNQVSYTYISFCRKTRKPEAMDRVRDLASKKAAVIFTKSSCYMSHSIKQLFYELGASPAVHELDKDPYGREMELALRSLGCSPSVPAVFIGGKFVGSARDIISLHVDGTLKQMLIDARAIWF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1404 185 CDD GRX_GRXh_1_2_like 95 176 - -
Lele08g1404 185 Gene3D Glutaredoxin 82 183 - -
Lele08g1404 185 Pfam Glutaredoxin 97 158 IPR002109 -
Lele08g1404 185 PANTHER GLUTAREDOXIN 84 184 IPR011905 -
Lele08g1404 185 ProSiteProfiles Glutaredoxin domain profile. 84 184 - -
Lele08g1404 185 SUPERFAMILY Thioredoxin-like 84 184 IPR036249 -
Lele08g1404 185 TIGRFAM GlrX-like_plant: glutaredoxin-like family 87 184 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1404 Lele-ChrLele08 8999385 8999942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1404 84 185 Miscellaneous Gene Families AT4G15690 50.000 1.57e-34 116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1404 08 8999385 8999942 Lele13g2042 13 27586790 27587098 CCT
Lele08g1404 08 8999385 8999942 Lele14g1974 14 25923553 25923861 CCT
Lele08g1404 08 8999385 8999942 Lele15g0365 15 2091584 2091886 CCT
Lele08g1404 08 8999385 8999942 Lele16g0384 16 2107526 2107834 CCT
Lele08g1404 08 8999385 8999942 Lele08g1404 08 8999385 8999942 ECH
Lele05g1560 05 9996112 9996420 Lele08g1404 08 8999385 8999942 hybridization
Lele06g1405 06 9053301 9053609 Lele08g1404 08 8999385 8999942 hybridization