Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1405 ATGGATAGAGTGAGGGATTTGGCATCAAAGAAAGCTGCAGTGATATTCACGAAGAGCTCGTGTTACATGAGCCACAGCATTAAGCAGCTTTTCTACGAGCTAGGAGCAAGCCCTGCAGTTCATGAGCTTGACAAGGACCCCTATGGCAGAGAAATGGAGTTGGCTTTAAGGGCTCTGGGTTGTAGCCCTTCAGTCCCTGCGGTGTTCATCGGAGGCAATTTCGTTGGTTCTGCAAGAGATATAATTTCTCTTCATGTTGATGGCACTCTCAAGCAAATGCTCATTGACGCTAAGGCCATATGGTTTTAG 309 0.4693 MDRVRDLASKKAAVIFTKSSCYMSHSIKQLFYELGASPAVHELDKDPYGREMELALRALGCSPSVPAVFIGGNFVGSARDIISLHVDGTLKQMLIDAKAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1405 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Lele06g1405 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lele06g1405 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Lele06g1405 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Lele06g1405 102 Pfam Glutaredoxin 14 75 IPR002109 -
Lele06g1405 102 Gene3D Glutaredoxin 1 100 - -
Lele06g1405 102 CDD GRX_GRXh_1_2_like 12 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1405 Lele-ChrLele06 9053301 9053609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1405 1 102 Miscellaneous Gene Families AT4G15690 50.000 1.18e-35 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1405 06 9053301 9053609 Lele13g2042 13 27586790 27587098 CCT
Lele06g1405 06 9053301 9053609 Lele14g1974 14 25923553 25923861 CCT
Lele06g1405 06 9053301 9053609 Lele15g0365 15 2091584 2091886 CCT
Lele06g1405 06 9053301 9053609 Lele16g0384 16 2107526 2107834 CCT
Lele06g1405 06 9053301 9053609 Lele06g1405 06 9053301 9053609 ECH
Lele06g1405 06 9053301 9053609 Lele07g1616 07 9999612 10001830 hybridization
Lele06g1405 06 9053301 9053609 Lele08g1404 08 8999385 8999942 hybridization