Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2042 ATGGAGAGAGTAAGAGATTTGGCATCAAACAGGGCCGCTGTAATATTCACAAAGAGCTCGTGTTGCATGTGCCACAGCATCAAGCAACTGTTCTATGAGCTGGGAGCGAGCCCAGCAGTGCACGAGCTGGACACTGATGCATATGGGAGAGAAATGGAAAGGGCTTTGAGAGGGATGGGTTGTAACCCTTCGGTTCCAGCAGTGTTCATTGGAGGCAAATTCGTGGGCTCGGCCAAAGATATCATATCCCTCCACGTCGATGGTTCTCTCAAACAGATGCTTATAAATGCCAAGGCCATATGGTTTTAG 309 0.4887 MERVRDLASNRAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDTDAYGREMERALRGMGCNPSVPAVFIGGKFVGSAKDIISLHVDGSLKQMLINAKAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2042 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lele13g2042 102 Pfam Glutaredoxin 14 75 IPR002109 -
Lele13g2042 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Lele13g2042 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Lele13g2042 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Lele13g2042 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Lele13g2042 102 Gene3D Glutaredoxin 1 101 - -
Lele13g2042 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Lele13g2042 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Lele13g2042 102 CDD GRX_GRXh_1_2_like 12 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2042 Lele-ChrLele13 27586790 27587098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2042 1 102 Miscellaneous Gene Families AT4G15700 49.020 2.96e-36 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1405 06 9053301 9053609 Lele13g2042 13 27586790 27587098 CCT
Lele07g1616 07 9999612 10001830 Lele13g2042 13 27586790 27587098 CCT
Lele08g1404 08 8999385 8999942 Lele13g2042 13 27586790 27587098 CCT
Lele13g2042 13 27586790 27587098 Lele13g2042 13 27586790 27587098 ECH
Lele13g2042 13 27586790 27587098 Lele15g0365 15 2091584 2091886 hybridization
Lele13g2042 13 27586790 27587098 Lele16g0384 16 2107526 2107834 hybridization