Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0105 ATGGCGTTGTTGCGATCGGTGGCCGTAAAAGGTGGAAAAGGGTCATCTTTGTTCTTCAGCTTAACACGGAGGTTAGTTCATGGGGCCCAATCCCTAAGCGTGCGAGCATTCTCGTCCTCCGTATCGCCGCCGTCCAAGGCTGTTTTATACGAGCTTCACGGCTCTCCTGACACCGTCACCAAGTTGGTAAACATTCCACCCGTTGAAATCAAAGATAATGATGTGTGCGTCAAGATGCTTGCTGCTCCTATCAATCCCTCCGATATCAATCGGATTGAAGGTGTATATCCTGTGAGACCGCCAGTACCAGCTATTGGTGGGTATGAAGGCATCGGAGAGGTGCATTCAGTGGGCTCTGCAGTTACAGCTCTATCTCCTGGAGATTGGGTTATTCCTTCTCCTCCCTCTTTTGGGACTTGGCAAACGTACATTGTCAAAGATCAGATTGTGTGGCATAAAATAAATAAGGATGTACCTATTGAATATGCTGCTACAATTACTGTCAATCCTTTGACTGCCCTAAGGATGCTTGAAGATTACATTACTTTGAATTCAGGAGATGCTCTTGTGCAAAATGGGGCTACAAGCATGGTTGGGAAGTGCGTCATTCAGATTGCACAATCTCGTGGTATTCACAACATCAATATAGTAAGGGACAGGGCAGGGATTGATGAAGTGAAGGAAAAACTTAAGAAATTGGGAGCTGATGAAGTTTATACTGAGAGCCAGTTGGAAGTGAAGAACGTCAAGAGTCTCTTGGGTGATATACCTGAACCTTCATTGGGATTTAACTGCGTTGGTGGCAATTCTGCTTCCCTGGTTCTCAAATTTTTGAGACAGGGAGGAACGATGGTGACATATGGTGGAATGTCTAAAAAGCCTATCACAGTGTCAACTGCATCCTTCATATTTAAGGATCTTTCCTTGAGGGGATTCTGGTTGCAGAAGTGGATGACCGCAGATAAAGCTGGAGAGAGCAGAAAAATGATAGACAGGCTTTTGGGTCTTGTACGAGATGGGAAGTTGAAATACGAGATGGAGCTGGTTCCCTTTGACAATTTCAAGTCAGCATTGGATAAGGCACTTGGCAAACTCGGTAGCCAACCTAAACAAGTGATCATATTCTAA 1128 0.4495 MALLRSVAVKGGKGSSLFFSLTRRLVHGAQSLSVRAFSSSVSPPSKAVLYELHGSPDTVTKLVNIPPVEIKDNDVCVKMLAAPINPSDINRIEGVYPVRPPVPAIGGYEGIGEVHSVGSAVTALSPGDWVIPSPPSFGTWQTYIVKDQIVWHKINKDVPIEYAATITVNPLTALRMLEDYITLNSGDALVQNGATSMVGKCVIQIAQSRGIHNINIVRDRAGIDEVKEKLKKLGADEVYTESQLEVKNVKSLLGDIPEPSLGFNCVGGNSASLVLKFLRQGGTMVTYGGMSKKPITVSTASFIFKDLSLRGFWLQKWMTADKAGESRKMIDRLLGLVRDGKLKYEMELVPFDNFKSALDKALGKLGSQPKQVIIF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0105 375 FunFam Enoyl-[acyl-carrier-protein] reductase, mitochondrial 47 183 - -
Lele12g0105 375 SUPERFAMILY GroES-like 46 204 IPR011032 -
Lele12g0105 375 SMART PKS_ER_names_mod 54 373 IPR020843 GO:0016491
Lele12g0105 375 FunFam Enoyl-[acyl-carrier-protein] reductase 1, mitochondrial 167 343 - -
Lele12g0105 375 CDD ETR 45 375 - -
Lele12g0105 375 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, MITOCHONDRIAL 27 375 - -
Lele12g0105 375 Pfam Zinc-binding dehydrogenase 198 318 IPR013149 -
Lele12g0105 375 Pfam Alcohol dehydrogenase GroES-like domain 73 134 IPR013154 -
Lele12g0105 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 159 341 IPR036291 -
Lele12g0105 375 Gene3D - 167 343 - -
Lele12g0105 375 Gene3D - 47 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0105 Lele-ChrLele12 876440 879629 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1215 09 21075325 21078770 Lele12g0105 12 876440 879629 hybridization
Lele10g1190 10 23089421 23094316 Lele12g0105 12 876440 879629 hybridization