Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1561 ATGCCAACTAGGTTTGTAGTGGTGGTTGCCCTGATGGAGGACACCCAAGAATTGGAGAATAAGGTGAATGGAGAAGTTGTTTCAGACAAAGAACCACAAAAGAAGGACGAAACCCTTGATGAAGTGCTTTCACGGCACAGGAAAGAATTATCACAGCTGCAGAAGAAGGAAATTGAACTGAAAAAGGCGGCAGCTAGAGGTAGCAAGGCTGAGCAGAAAGCCAAGAAGAAACAAGTGGAGGAACAGATTTCTCAACTTTCTGCCAAGCTTAAAGAGAAGCATGCAGAAGAATTGTCCAGATTAGGCTTTAGCAGTAGTAATGCAAATGAAAAGAGCAGTGTGGATAGTTTGGTGAAGGCCATAGCTGGAATCTCAGTTACCAGCCAACCTGATCATTCAAAGGTCAGCAAGGCCAAACAGAGGCGAGACAAAAGGGCTCAACAGGAAGCAGAAAGGGAGCAAAGAATCCAAGCTGAGCAAAATGACATTTTAAGTGATCGTATGGTCGAAAACGAGAAGTTGGAAAGAAAGCTGAAGCCTCTTGGTTTGACTGTCAGTGAAATAAAGCCAGACGGGCATTGTCTTTATAGAGCTGTTGAGGATCAGCTAGCCCTCCTCTCAGGGGGCATATCTCATTATACATACCAAGAACTCAGAGAAATGGCAGCGGAATATATGAGAAAGCATGCAGCTGATTTCCTTCCATTTTTCCTGTCAGAGAATCTGGTAGAAGGGGATTCTGATGAATCCCTTGCCCAGAAGTTTGAAGATTACTGTAAAGATGTGAAGTCAACAGCAATATGGGGCGGACAACTAGAGCTTGGCGCTTTGACTCACTGCTTGAAAAAGCATATTATGATATTTTCAGGCTCCTTCCCAGACGTTGAGATGGGGAAAGAGTACAAATCTCAAGGCAGCACCGATTCCTTGAATTCAAGCATCATGCTTTCATACCATAAGCACGCATTCGGACTAGGTGAGCATTACAATTCTTTGGTTCCAGACGCGGTAAAATAG 1017 0.4405 MPTRFVVVVALMEDTQELENKVNGEVVSDKEPQKKDETLDEVLSRHRKELSQLQKKEIELKKAAARGSKAEQKAKKKQVEEQISQLSAKLKEKHAEELSRLGFSSSNANEKSSVDSLVKAIAGISVTSQPDHSKVSKAKQRRDKRAQQEAEREQRIQAEQNDILSDRMVENEKLERKLKPLGLTVSEIKPDGHCLYRAVEDQLALLSGGISHYTYQELREMAAEYMRKHAADFLPFFLSENLVEGDSDESLAQKFEDYCKDVKSTAIWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSQGSTDSLNSSIMLSYHKHAFGLGEHYNSLVPDAVK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1561 338 PANTHER OTU DOMAIN CONTAINING PROTEIN 44 334 - -
Lele05g1561 338 MobiDBLite consensus disorder prediction 63 91 - -
Lele05g1561 338 FunFam Cysteine proteinases superfamily protein 169 334 - -
Lele05g1561 338 MobiDBLite consensus disorder prediction 134 157 - -
Lele05g1561 338 SUPERFAMILY Cysteine proteinases 146 334 IPR038765 -
Lele05g1561 338 MobiDBLite consensus disorder prediction 128 157 - -
Lele05g1561 338 Pfam OTU-like cysteine protease 189 329 IPR003323 -
Lele05g1561 338 ProSiteProfiles OTU domain profile. 183 335 IPR003323 -
Lele05g1561 338 Coils Coil 43 96 - -
Lele05g1561 338 Gene3D - 169 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1561 Lele-ChrLele05 10002932 10006217 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1561 05 10002932 10006217 Lele05g1561 05 10002932 10006217 ECH
Lele05g1561 05 10002932 10006217 Lele07g1617 07 10007909 10011368 hybridization
Lele05g1561 05 10002932 10006217 Lele08g1405 08 9006216 9009003 hybridization