Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1560 ATGGATAGAGTGAGGGATTTGGCATCAAAGAAAGCAGCAGTGATATTCACAAAGAGCTCGTGTTACATGAGCCACAGCATTAAGCAGCTGTTCTACGAGCAAGGAGCGAGCCCTGCAGTTCATGAGCTTGACAAGGACCCATATGGCAGAGAAATGGAATTGGCTTTAAGGTCTCTGGGTTGTAGCCCTTCAGTCCCTGCGGTGTTCATTGGAGGCAAGTTCGTTGGTTCTGCAAGAGATATCATTTCTCTTCATGTTGATGGCACTCTCAAGCAAATGCTCATTGATGCTAGGGCCATATGGTTTTAG 309 0.466 MDRVRDLASKKAAVIFTKSSCYMSHSIKQLFYEQGASPAVHELDKDPYGREMELALRSLGCSPSVPAVFIGGKFVGSARDIISLHVDGTLKQMLIDARAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1560 102 Pfam Glutaredoxin 14 75 IPR002109 -
Lele05g1560 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Lele05g1560 102 Gene3D Glutaredoxin 1 100 - -
Lele05g1560 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Lele05g1560 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Lele05g1560 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lele05g1560 102 CDD GRX_GRXh_1_2_like 12 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1560 Lele-ChrLele05 9996112 9996420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1560 1 102 Miscellaneous Gene Families AT4G15690 50.000 1.88e-35 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1560 05 9996112 9996420 Lele05g1560 05 9996112 9996420 ECH
Lele05g1560 05 9996112 9996420 Lele07g1616 07 9999612 10001830 hybridization
Lele05g1560 05 9996112 9996420 Lele08g1404 08 8999385 8999942 hybridization