Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0940 ATGTCTGCGATAGCGGCTTGCTCCCATATAATCTTCAGAGAGAATTACCAGCATCCGTGGCTGATCAGCAGCGGAGGAGCTAATTCGTTCTCGTTTAAGACTTCGACTGGGACTAGTTGGATTGAACGCAGAAAGAAGGAAGGCGAAGGGAAGAGAATAGGAAGGAGGAATGTACGGGTAGAAGCGCTTTGGCCAGATCTGTCGAGACCCACTGTAATTGAGATGGAACCCATCACGGATTCTGATCATCTCGATCAAATTCTTCTAAACGCTCAGCAAAATTCCCAGCCCATTCTCATCGATTGGATGGCTGCTTGGTGCAGGAAATGTATATATTTGAAGCCCAAGTTGGAAAAGCTGGCCGCTGAGTATCATAAGAAGCTCAAATTTTATTGTGTGGATGTTAATAAAGTACCTCAATCGCTAGTCAAGCGTGGTAACATCTCTAAAATGCCAACGATTCAGCTGTGGAAAGACGGAGAGATGAAGGCTGAAGTGATTGGAGGACACAAGGCCTGGATGGTGATTGAAGAAGTGAGAGAAATGATAAAAAACTGTGTATATCAATGGCAAGCCTTGCAATAG 585 0.4479 MSAIAACSHIIFRENYQHPWLISSGGANSFSFKTSTGTSWIERRKKEGEGKRIGRRNVRVEALWPDLSRPTVIEMEPITDSDHLDQILLNAQQNSQPILIDWMAAWCRKCIYLKPKLEKLAAEYHKKLKFYCVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWMVIEEVREMIKNCVYQWQALQ 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0940 194 ProSiteProfiles Thioredoxin domain profile. 58 188 IPR013766 -
Lele05g0940 194 SUPERFAMILY Thioredoxin-like 74 184 IPR036249 -
Lele05g0940 194 CDD TRX_family 88 184 - -
Lele05g0940 194 Gene3D Glutaredoxin 72 185 - -
Lele05g0940 194 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 33 186 IPR044253 GO:0009570
Lele05g0940 194 FunFam Thioredoxin 71 188 - -
Lele05g0940 194 Pfam Thioredoxin 92 173 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0940 Lele-ChrLele05 5789913 5791025 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0940 05 5789913 5791025 Lele05g0940 05 5789913 5791025 ECH
Lele05g0940 05 5789913 5791025 Lele07g0978 07 5873592 5874729 hybridization
Lele05g0940 05 5789913 5791025 Lele08g0795 08 4980359 4981522 hybridization