Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1619 ATGGGAGTGATTACGAGCATGGTTGCAGAAAAACCAGTGGTGATATTCGGCAAGAGCAACTGTTGCTTGAGCTTCTCCGTTAAGTCACTGATAAGCAGTTTTGGGGCAAATCCCACTGTGTATGAGATTGACCAAATCAGCAAGGGGGAGCAGATAGAGAGCGAATTGCTCCAACTGGGAAGTGAACCAAGTGTCCCAGCTGGGTTCATAGGCCAACAATTCATTGGTGGGGCCCACAAAATCATGAGCCTCCATGTCAGGAACGAGTTACCCACTCTGCTCTTGAATGCCAGAGCCATTTGGATTTGGACACCAAAGAATAATGATTCGTAG 333 0.4745 MGVITSMVAEKPVVIFGKSNCCLSFSVKSLISSFGANPTVYEIDQISKGEQIESELLQLGSEPSVPAGFIGQQFIGGAHKIMSLHVRNELPTLLLNARAIWIWTPKNNDS 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1619 110 SUPERFAMILY Thioredoxin-like 3 101 IPR036249 -
Lele07g1619 110 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lele07g1619 110 Pfam Glutaredoxin 13 75 IPR002109 -
Lele07g1619 110 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 102 IPR011905 -
Lele07g1619 110 CDD GRX_GRXh_1_2_like 12 90 - -
Lele07g1619 110 PANTHER GLUTAREDOXIN 3 102 IPR011905 -
Lele07g1619 110 Gene3D Glutaredoxin 3 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1619 Lele-ChrLele07 10017974 10018306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1619 4 102 Miscellaneous Gene Families AT4G15700 48.485 4.82e-34 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1562 05 10008749 10009069 Lele07g1619 07 10017974 10018306 hybridization
Lele06g1407 06 9068415 9069181 Lele07g1619 07 10017974 10018306 hybridization