Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1406 ATGGAATTGATCACAAGCATGGTAGCGGAGAAGCCAGTGGTAATATTCAGCAAGAGCAGCTGTTGCTTGAGCTACTCCATTAAGTCCCTGATAAGTGGTTTTGGGGCTAATGCGACTGTGTATGAGATTGATCAAATAAGCAATGGGAAGCAGATTGAGAGGGAATTGATTGAATTGGGATGTCAACAAAGCGTACCTGCTGTGTTCATAGGCCAAAAGTTCATCGGTGGTGCCAATCAAATCATGAGCCTCCATGTTCGGAACGAGTTAGTGACTCTGCTCATGAACGCCAAAGCCATTTGGATTTGGAACAAAAAGTGA 321 0.4424 MELITSMVAEKPVVIFSKSSCCLSYSIKSLISGFGANATVYEIDQISNGKQIERELIELGCQQSVPAVFIGQKFIGGANQIMSLHVRNELVTLLMNAKAIWIWNKK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1406 106 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 102 IPR011905 -
Lele08g1406 106 Pfam Glutaredoxin 13 75 IPR002109 -
Lele08g1406 106 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Lele08g1406 106 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Lele08g1406 106 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Lele08g1406 106 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Lele08g1406 106 Gene3D Glutaredoxin 2 106 - -
Lele08g1406 106 CDD GRX_GRXh_1_2_like 12 93 - -
Lele08g1406 106 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lele08g1406 106 PANTHER GLUTAREDOXIN 1 102 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1406 Lele-ChrLele08 9011131 9011451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1406 1 102 Miscellaneous Gene Families AT4G15700 53.922 3.45e-39 124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1562 05 10008749 10009069 Lele08g1406 08 9011131 9011451 hybridization
Lele06g1407 06 9068415 9069181 Lele08g1406 08 9011131 9011451 hybridization