Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1483 ATGGAGCTAAGCAAGGTGACGTTGGAGATCTTCTCCAAATTGGAGCAGAAATGGCTTTCTCACTGTGAAACCTCCAAGAAAACTCGCGTTCTCAGCATCGATGGTGGAGGAACCACCGGCATTGTTGCCGTAGCCGCCCTACTCCACCTCGAGCAACAGATCCGTCTTCAGACCGGCGATTCCGACGCTCGTATTGTTGATTTCTTCGACATCGTTGCTGGTTCTGGCATTGGCGCCATCCTTGCGGCCATGATCACCGCCGACGATGGCTCCGGCAGGCCTCTCTACACTGCTAAGGACGCTGTCCATGTCATCACCGAAAGGAATTCGGAACTCTACAAGCCTAAGACCGCTGGAGTTTTTTGCCGTCGCCGGAGACTGTCCTCCAGGAGCATGGATAACGTCTTGAAGCAAGTCTTCCAGAGAAAAGAAGACGGAAAGTTGTTGACCTTGAAGGACACGTGTAAACCCTTGCTTATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCATTCGTGTTTTCTCGAGCTGACGCGTCAGAATCGCCGAGTTTCAACTTTGAGCTTTGGAAGGTATGCCGCGCCACCACAGCCACGCCGAGCCTCTTCAAGCCCTTCCACTTTACTTCCGTGGACGGCAAGACCAGCTGCTCCGCCATCGACGGCGGTCTGGTGATGAACAACCCGACGGCGGCGGCGGTGACGCACGTGCTACACAACAAGCGGGATTTCCCGACGGTTAACGGCGTGGACGATCTCCTAGTACTGTCCTTAGGCAACGGTGCGTCCAGTGGAACACAGGCTCGAAAGATATGCGATAATGGGGAGTGTTCGACGTCGTGTGTGGTCGACATTGTGGCGGATGGGGTCTCGGAGACGATCGACCAAATGTTGGGGAACGCCTTCTGTTGGAACCATACGGATTACGTAAGGATTCAGGCGTTGGGTTTGGGAAGAACGAGGGAGGAGGTGCTGAAAGAGAGAGGACTAGAGTCTTTAGCGTTTGGGGGGAAGAGATTGCTGAAAGAGAGTAACGAAGAGAGAATCGATTGCTTCGTGCAGCGTCTTGTTGCATCTGGAAAGTCTAGCCTCCCACCTAGTCCCTGCAAGCATTCCGCCGTCGTTACTCCTCTGGCCGTGGCGGAGGCTCGCTAG 1152 0.546 MELSKVTLEIFSKLEQKWLSHCETSKKTRVLSIDGGGTTGIVAVAALLHLEQQIRLQTGDSDARIVDFFDIVAGSGIGAILAAMITADDGSGRPLYTAKDAVHVITERNSELYKPKTAGVFCRRRRLSSRSMDNVLKQVFQRKEDGKLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATTATPSLFKPFHFTSVDGKTSCSAIDGGLVMNNPTAAAVTHVLHNKRDFPTVNGVDDLLVLSLGNGASSGTQARKICDNGECSTSCVVDIVADGVSETIDQMLGNAFCWNHTDYVRIQALGLGRTREEVLKERGLESLAFGGKRLLKESNEERIDCFVQRLVASGKSSLPPSPCKHSAVVTPLAVAEAR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1483 383 Gene3D Cytosolic phospholipase A2 catalytic domain 17 363 - -
Lele05g1483 383 PANTHER PATATIN-LIKE PROTEIN 6 1 372 - -
Lele05g1483 383 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Lele05g1483 383 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Lele05g1483 383 SUPERFAMILY FabD/lysophospholipase-like 26 315 IPR016035 -
Lele05g1483 383 CDD Pat17_PNPLA8_PNPLA9_like 30 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1483 Lele-ChrLele05 9501567 9502887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1483 1 378 Acyl Lipid Metabolism Gene Families AT3G63200 74.541 0.0 579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1483 05 9501567 9502887 Lele13g1994 13 27323125 27324324 CCT
Lele05g1483 05 9501567 9502887 Lele14g1928 14 25654935 25658123 CCT
Lele05g1483 05 9501567 9502887 Lele15g0411 15 2356496 2357734 CCT
Lele05g1483 05 9501567 9502887 Lele16g0436 16 2340114 2342255 CCT
Lele05g1483 05 9501567 9502887 Lele05g1483 05 9501567 9502887 ECH
Lele05g1483 05 9501567 9502887 Lele07g1543 07 9499040 9500364 hybridization
Lele05g1483 05 9501567 9502887 Lele08g1334 08 8514554 8515881 hybridization