Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1994 ATGGAACTCAGCAAAGTCACCTTAGAGATCTTCTCCAAACTCGAGCAGAAATGGCTCTCTCGCTGCGAAAACGCCCACAAAACCCGTATTCTCTGCATTGACGGCGGAGGAACAACCGCCGCTGTTGCCGGCGCCTCCCTGGTTCGCCTCGAGGACCAGATCCGTCTTCAGACCCGCGATCCCCAAGCTCAAATCGCCGACTTCTTCGACATCATAGCCGGGACCGGCATTGGTGCCATCCTGGCAGCCATGATCATTGCCGACGACGGCTCCGGCAGGCCCCTCTATACTGCAAGAGATGCCGTGCGTATCATCACACAGAGGAATTCTGAACTCTTTAAACCTAAACTCCCCAGAGTTCTACGCTGGCGTCGGAGGTTTTCTTCCAAGAGCATGGACAGGGTGCTGCAGGAAGTGTTCAGGAGAAGAGTGGACGGACGACTGTTGACCATGAAGGACACGTGTAGGCCACTGCTGATACCTTGCTTTGACCTCAGGAGTGCAGCTCCGTTTGTGTTCTCACGCGCAGACGCGTCCGAGTCGCCCAGTTTCAACTTCGAGCTATGGAAAGCGTGGGGTTTTGGGAGTGAGGAGGAGGTGCTGAAGGAGAAAGGCGTGGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTGAAGGAGACTAACGGACACAGAATCGATAGCTTTGTGCAGCGTCTTGTCGCTTCGGAAAAGGCCAACCTCCCTGCCTAG 729 0.5556 MELSKVTLEIFSKLEQKWLSRCENAHKTRILCIDGGGTTAAVAGASLVRLEDQIRLQTRDPQAQIADFFDIIAGTGIGAILAAMIIADDGSGRPLYTARDAVRIITQRNSELFKPKLPRVLRWRRRFSSKSMDRVLQEVFRRRVDGRLLTMKDTCRPLLIPCFDLRSAAPFVFSRADASESPSFNFELWKAWGFGSEEEVLKEKGVESLPFGGKRLLKETNGHRIDSFVQRLVASEKANLPA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1994 242 Gene3D Cytosolic phospholipase A2 catalytic domain 17 192 - -
Lele13g1994 242 Pfam Patatin-like phospholipase 31 189 IPR002641 GO:0006629
Lele13g1994 242 SUPERFAMILY FabD/lysophospholipase-like 27 191 IPR016035 -
Lele13g1994 242 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 242 IPR002641 GO:0006629
Lele13g1994 242 PANTHER PATATIN-LIKE PROTEIN 6 196 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1994 Lele-ChrLele13 27323125 27324324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1994 195 241 Acyl Lipid Metabolism Gene Families AT3G63200 65.957 2.09e-13 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1483 05 9501567 9502887 Lele13g1994 13 27323125 27324324 CCT
Lele13g1994 13 27323125 27324324 Lele15g0411 15 2356496 2357734 hybridization
Lele13g1994 13 27323125 27324324 Lele16g0436 16 2340114 2342255 hybridization