Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0411 ATGGAACTCAACAAAGTCACGTTAGAGATCTTCTCCAAACTCGAGCAGAAATGGCTCTCTCGCTGCGAAAACGCCCACAAAACCCGCATTCTCTGCATTGACGGCGGAGGAACAACCGCCGCTGTTGCCGGCGCCGCCCTGGTTCGCCTCGAGGACCAGATCCGTCTTCAGACCCGCGATCCCCAAGCTCAAATCGCCGACTTCTTCGACATCATAGCCGGGACCGGCATTGGTGCCATCCTGGCAGCCATGATCATTGCAGACGACGGCTTCGGTAGGCCCCTCTATACTGCAAGAGATGCCGTGCGTGTCATCACACATAGGAATTCTGAACTCTTTAAACCTAAACTCCCCAGAGTTCTGCGCTGGCGTCGGAGGTTTTCTTCCAAGAGCATGGACAGGGTGCTGAAGGAAGTGTTCAGGAGAAGAGTGGACGGACGACTGTTGACCATGAAGGACACGTGTAGGCCACTGCTGATACCTTGCTTTGACCTCAGGAGTGCAGCTCCGTTTGTGTTCTCACGCGCAGACGCGTCCGAGTCGCCCAGTTTCAACTTCGAGCTCTGGAAAGCGTTGGGTTTTGGGAGTGGAGAGGAGGTGCTGAAGGAGAAAGGCGTGGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTGAAAGAGACTAACGGACACAGAATCGATAGCTTTGTGCAGCGTCTTGTCGTTTCGGAAAAGGCCAACCTACAGCCTAGCGCTGCCAACGCAGCCACCGCTAACCCTATCGGCGGCAGTTAG 771 0.5538 MELNKVTLEIFSKLEQKWLSRCENAHKTRILCIDGGGTTAAVAGAALVRLEDQIRLQTRDPQAQIADFFDIIAGTGIGAILAAMIIADDGFGRPLYTARDAVRVITHRNSELFKPKLPRVLRWRRRFSSKSMDRVLKEVFRRRVDGRLLTMKDTCRPLLIPCFDLRSAAPFVFSRADASESPSFNFELWKALGFGSGEEVLKEKGVESLPFGGKRLLKETNGHRIDSFVQRLVVSEKANLQPSAANAATANPIGGS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0411 256 PANTHER PATATIN-LIKE PROTEIN 6 196 240 - -
Lele15g0411 256 Gene3D Cytosolic phospholipase A2 catalytic domain 17 193 - -
Lele15g0411 256 Pfam Patatin-like phospholipase 31 192 IPR002641 GO:0006629
Lele15g0411 256 SUPERFAMILY FabD/lysophospholipase-like 27 192 IPR016035 -
Lele15g0411 256 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 247 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0411 Lele-ChrLele15 2356496 2357734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0411 190 253 Acyl Lipid Metabolism Gene Families AT3G63200 53.125 5.12e-15 72.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1483 05 9501567 9502887 Lele15g0411 15 2356496 2357734 CCT
Lele13g1994 13 27323125 27324324 Lele15g0411 15 2356496 2357734 hybridization
Lele14g1928 14 25654935 25658123 Lele15g0411 15 2356496 2357734 hybridization