Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0436 ATGGAACTCAGCAAAGTCACGTTGGAGATCTTCTCCAAACTCGAGCAGAAATGGCTCTCTCGCTGCGAAACCACCCACAAAACCCGCATTCTCTGCATTGACGGCGGAGGAACAACCGCCGTTGTTGCCGGCGCTGCCGTGGTTCGCCTCGAGGACCAGATCCGTCTCCAGACCCGCGATCCCCGAGCTCAAATAGCCGACTTCTTCGACATCATTGCTGGGACCGGCATTGGTGCCATCCTTGCAGCCATGATCACTGCCGACGACGGCTCCGCTCGGCCCCTTTATACTGCCAGAGATGCCGTGCGTGTCATCACACACAGGAATTCTGAACTCTTTAAGCCGAAACTCCCCAGAGTTTTGCGCTGGCGTCGGAGATTTTCCTCCAAGAGCATGGACAGGGTGCTGAAGGAAGTGTTCAGGAGAAGAGTGGACGGACGACTGTTGACCTTGAAGGACACTTGTAAGCCCCTGCTGATACCTTGCTTTGACCTCAACAGTGCAGCTCCGTTTGTTTTCTCTTGCGCAGACGCGTCAGAATCACCCAGTTTTAACTTCGAGCTCTGGAAAGTATGTCGCGCCACCTCAGCCACGCCAAGTCTCTTCAAGCCTTTTCAGATGACCTCCGTCGACGGGAAGACCTCCTGCCGCGCCATCGACGGTGGACTGGTGATGAACAACCCGACGGCGGCGGCCGTGACTCACGTGCTGCACAATAAGCGTGATTTTCCGTCAGTGAAGGGCGTGGGAGATCTCTTGGTCCTCTCCATAGGGAATGGGACGTCGATTATCGGAGCTTCGGGAAGGAAGGTGAGTGAGAAGAAGGAGACATTGTGTTCGATGTCGTCGATGGTTGACATTGTCGTGGAGGGTGTGTCGGAAACCATTGACCAAATGCTGGGGACTGCCTTCTGCTGGAACCGTACGGACTATGTAAGACTCCAGGCGTTGGGTTTGGGGAGCGGGGAGGAGGTGCTGAAGGAGAAAGGTGTGGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTGAAAGAGACTAACGGACACAGAATCGATGGCTTTGTGCAGCGTCTAGTCGCTTCGGAAAAGGCCAACCTGCCGCCTTGTGGTGCCAACGCAGCCGCCGTTAAGCCTATCGGCGGCAACGAACGAAAGCATATTTTTCTGCACTCCAATGCTCAGGAACAAGAACAAACCAGTTTTGATATGGATATATGGATTGCCACATCAATTTTCACTTGTCAGAAGCCAAATTGCAGCAGCAAATCTTCCCGTGCTAGAAAAGGGAATGGTTCTCAAGTCAGATTGTTGACCTCGATCACTGCGAGTAACAAAATAGCTCTGGAACGTGCCTTTTTCATTCGCGAGATTCTCTCCTTCCTAAGCTTACAGTTCTGA 1395 0.5326 MELSKVTLEIFSKLEQKWLSRCETTHKTRILCIDGGGTTAVVAGAAVVRLEDQIRLQTRDPRAQIADFFDIIAGTGIGAILAAMITADDGSARPLYTARDAVRVITHRNSELFKPKLPRVLRWRRRFSSKSMDRVLKEVFRRRVDGRLLTLKDTCKPLLIPCFDLNSAAPFVFSCADASESPSFNFELWKVCRATSATPSLFKPFQMTSVDGKTSCRAIDGGLVMNNPTAAAVTHVLHNKRDFPSVKGVGDLLVLSIGNGTSIIGASGRKVSEKKETLCSMSSMVDIVVEGVSETIDQMLGTAFCWNRTDYVRLQALGLGSGEEVLKEKGVESLPFGGKRLLKETNGHRIDGFVQRLVASEKANLPPCGANAAAVKPIGGNERKHIFLHSNAQEQEQTSFDMDIWIATSIFTCQKPNCSSKSSRARKGNGSQVRLLTSITASNKIALERAFFIREILSFLSLQF 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0436 464 Gene3D Cytosolic phospholipase A2 catalytic domain 18 366 - -
Lele16g0436 464 SUPERFAMILY FabD/lysophospholipase-like 27 317 IPR016035 -
Lele16g0436 464 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Lele16g0436 464 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Lele16g0436 464 CDD Pat17_PNPLA8_PNPLA9_like 49 316 - -
Lele16g0436 464 PANTHER PATATIN-LIKE PROTEIN 6 1 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0436 Lele-ChrLele16 2340114 2342255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0436 1 378 Acyl Lipid Metabolism Gene Families AT3G63200 68.766 0.0 541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1483 05 9501567 9502887 Lele16g0436 16 2340114 2342255 CCT
Lele13g1994 13 27323125 27324324 Lele16g0436 16 2340114 2342255 hybridization
Lele14g1928 14 25654935 25658123 Lele16g0436 16 2340114 2342255 hybridization