Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1334 ATGGAGCTAAGTAAGGTGACGCTGGAGATCTTCTCCAAATTGGAGCAGAAATGGCTTTCTCACTGTGAAACCTCCAAGAAAACTCGCATTCTCAGCATCGATGGTGGAGGAACCACGGGCATTGTTGCCGGAGCCGCCCTACTCCACCTCGAGCAGCAGATCCGTCTTCAGACCGGCGATTCCAACGCTCATATAGTTGATTTCTTCGACATCGTTGCTGGTACTGGCATTGGCGCCATCCTTGCCGCCATGATCACCGCAGACGATGGCTCCGGCAGGCCTCTCTATACTGCCAAGGACGCCGTCCATGTCATCACAGAAAGGAATTCAGGACTCTACAAGCCTAAAACAGCCGGAGTTTTTTGCCGTCGCCGGAGACTGTCCTCCAGGAGCATGGATAACGTATTGAAGAAAGTCTTCCAGAGAAGGGAGGACGGAAAGTTGTTGACCTTGAAGGACACGTGTAAACCCCTGCTTATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCATTCGTGTTTTCCCGAGCTGACGCGTCAGAATCGCCGAGTTTCGACTTTGAGCTCTGGAAGGTATGCCGCGCCACCACAGCCACACCGAGCCTCTTCAAGCCATTCCACTTTACTTCCGTGGACTCCAAGACCAGCTGCTCCGCCGTCGACGGCGGTCTGGTGATGAACAACCCCACGGCGGCGGCGGTGACTCACGTGCTACACAACAAGCGGGATTTCCCGACGGTTAACGGGGTGGAGGATCTCCTAGTACTGTCCTTTGGCAACGGTGTGTCCAGTGGAACACAGGCGCTAAAGATATGCGATAATGGGGAGTGCTCGGCGTCGTGTGTGGTCGACATTGTGGTGGACGGGGTCTCCGAGACGATCGACCAAATGTTGGGGAACGCCTTCTGTTGGAACCATACGGATTACGTAAGGATTCAGGTGTTGGGTTTGGGAAGGACGAGAGAAGAAGTTCTGAAAGAGAGAGCACTAGAGTCATTAGCGTTTGGGGGAAAGAGGTTGCTGAAAGAGAGTAACGAAGAGAGAATCAATAGCTTCGTGCAGCGTCTTGTTGCTTCTGGAAAGTCCAGCCTCCCACCTAGTCCCTGCAAGCATTCCGCCGTCGTTACTCCTATTGCCGTCACCGAGGCTCGCTAG 1152 0.5399 MELSKVTLEIFSKLEQKWLSHCETSKKTRILSIDGGGTTGIVAGAALLHLEQQIRLQTGDSNAHIVDFFDIVAGTGIGAILAAMITADDGSGRPLYTAKDAVHVITERNSGLYKPKTAGVFCRRRRLSSRSMDNVLKKVFQRREDGKLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATTATPSLFKPFHFTSVDSKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPTVNGVEDLLVLSFGNGVSSGTQALKICDNGECSASCVVDIVVDGVSETIDQMLGNAFCWNHTDYVRIQVLGLGRTREEVLKERALESLAFGGKRLLKESNEERINSFVQRLVASGKSSLPPSPCKHSAVVTPIAVTEAR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1334 383 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Lele08g1334 383 Gene3D Cytosolic phospholipase A2 catalytic domain 17 363 - -
Lele08g1334 383 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Lele08g1334 383 SUPERFAMILY FabD/lysophospholipase-like 26 318 IPR016035 -
Lele08g1334 383 CDD Pat17_PNPLA8_PNPLA9_like 30 313 - -
Lele08g1334 383 PANTHER PATATIN-LIKE PROTEIN 6 1 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1334 Lele-ChrLele08 8514554 8515881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1334 1 378 Acyl Lipid Metabolism Gene Families AT3G63200 74.016 0.0 572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1334 08 8514554 8515881 Lele08g1334 08 8514554 8515881 ECH
Lele05g1483 05 9501567 9502887 Lele08g1334 08 8514554 8515881 hybridization
Lele06g1340 06 8571102 8572427 Lele08g1334 08 8514554 8515881 hybridization