Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1395 ATGTTTATCAGGCCAAGGGGTCCTAGTGTTTTTAACATATTCAAATGCAAGCGTCTGGAAGAATCATCCCTGACAACAGGTTTGCTTCACGATGTTCCACCAGAGATTGAGTTGTCTGACTATGGAAGGATTCCAAGTCCAGGCAGTGAGAGCCCTTCAGGGCTTCTTAATGGTGAGAGTTTGAACATAGAGCCAATCTCCGATTTGGACCTCTTCTTTGAAAGGCTTTACAGCTACTACTGTGAGAAAGGGCTTTGGTGCATTATTATAAAGTGGATTGTTGAACTTCTTAGTCTAGGATTTACCATATGTTTCTCAGGATTTTTCTTATTATATGTTGATTGGAATGGACTTCGCAATGCAAAGTGTGGGATGGATGCAGTTGAATCTGGAATTAAGCCTTGTGAGCTTGGTAAAGAAGCTATTCATCAACACCCTCTAACCCCTCTAACACTTACAAAGGTTATTATTGTTGGATATTTAGCTATATTTTCCATCTATTGGATATTCTGTTTCTTGAGGTTCTTTGCCCAACTAAAGGATATTCTGGAAATCCGTCACTTTTATTACAACAGTCTCCATGTTACTGATAATGAAATCCAAACTATGCCCTGGGCTACAATTCTTGAAAAGGTTGTTTTGGCACAAAGTTCACGACAGCTCTGTGTGGTAAAGGATCTCTCTGCTCATGACATGGTGATGAGACTGATGCGGAAAGAAAACTACTTGATTGGAATGATCAACAAGGGAGTGCTTGCTTTCCCCATTTCTCAGTGGGTCCCAGGTGCTGGTCCTACAGTGAAATGCGGTCCTAATGGAACAAGATATCGTCTTATACTAACCAAGACCCTCGAGTGGACTTTGAACTGGTGCATCCTTCAAAGCATGTTTGATCGAAACTTTTGCGTTAGAAGGGATTTTGTGTCAAACCCACAGACATTAAAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTTTCTCCATTTCTTGTCATATTCATGTTGGTGTATCTCTTTCTGAGGCATGCTGAACAATTTTATAATCATCCAAGCACAGCATCATCTCGAAGGTGGTCAAATCTGTCAAGGTGGATCTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAAGCATCGGATAAGTAGCAGTGCAATACATGCTTCTCATTATCTCAAGCAATTTCCTTCACCTATTATATCGATCCTTGCCAAGTTCATATCTTTCGTATCAGGTGGATTTGCTGCAATTCTGATCATCATTGCTTTTCTTGAGGAATCTCTACTTGAGGGCCATATATTTGGTCGAAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACAGCTGTTAGCCGGTTTACGGTGACGAATGAGCTTCTTGTTCTAGATCATGAGGGAGCAATGTCTATGGTTATTCAGCATACACACTATATGCCAAAAAGGTGGCGTGGCAAAGAAAGTACTGAAATGGTCCGTGTTGAGTTTGGAACATTGTTTCAGTACACTGGGATGATGTTACTTGAGGAGATGGCCTCGATTTTCCTCACTCCATATTTGCTTCTATTTGTTGTTCCCAAGCGAGTTGATGATATTCTGCAGTTCATTGCAGATTTCACAGCTGATGTTGAAGGGGTTGGCCATGTTTGCAGTTTTAGTGTCTTTGATTTTCAAGCCTATGGAAACAGCAAATATGGTTCCCCATGCGATGCACCTCGCAACAGGAGGAGTTCCCAGGGGAAGATGGAGAAATCATTTCTGAGCTTTCAGAGTACCTACCAATCATGGGAACCAAATATTCAGGGGAAGCAGTTTTTGCTGAATCTTAAAACGTTGAGAGAGCAAAATTTACCAGGACATGGAAACAGATATGCATCTTCCCCTCCTAAAATGGGGCTGGGTGGTCCCTACCTGAGGCGTAATGGAGACAGAAACTTGTTAATATCCAGGGAAATGCCACGTAATACTTTCAAAATTGGTAATCACTTGGATTCATTGTGGCCAAGTGATGCCAATCAAAACAATAATCTTTATATCCTTGATTGCTACTATACTTCTCGACCTCATCACGTTCCAACAGAAGAACCATTTGAGAAGACTGAGCTTCATTCCAGAGAGTATTGGATATCCTCGGAGAATGAACCTGGGTATGATGAATACTTAAGAGAGTATAGTGGGGATCGAGCTGAATCTCATTTTGGGGCATCCACATCAGCTCCCTTTTTCAGGGAAGCTCTACTTGAAGGTCGAAGGGGTAGTGATCTGCCAGAGTCGACAAAGAGTCAGTGGTGGGCTAGAAGTCGACCACGTGGTGGGCAAGCACAGACAAGCTTTTTTGAGCCTCCAGATTTCAATCACCAGACATTTAACTATCATGATAGGTTATCTGATAGATGTTCAGATGACCAAGAACAACACTTGGACTGGAGAGATTATCGTAGATTATCTAGAACAACACACACAGATGACTTAGAGGCAGGGGAATTTAATCTTCATTTTGATGATATTTATAGCAGACCCCCAGAAACACCCACTTTTAATCCAGGCACTGCAAGCCTTTGA 2565 0.4168 MFIRPRGPSVFNIFKCKRLEESSLTTGLLHDVPPEIELSDYGRIPSPGSESPSGLLNGESLNIEPISDLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCELGKEAIHQHPLTPLTLTKVIIVGYLAIFSIYWIFCFLRFFAQLKDILEIRHFYYNSLHVTDNEIQTMPWATILEKVVLAQSSRQLCVVKDLSAHDMVMRLMRKENYLIGMINKGVLAFPISQWVPGAGPTVKCGPNGTRYRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPQTLKKRLMVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVDHLFKHRISSSAIHASHYLKQFPSPIISILAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAVSRFTVTNELLVLDHEGAMSMVIQHTHYMPKRWRGKESTEMVRVEFGTLFQYTGMMLLEEMASIFLTPYLLLFVVPKRVDDILQFIADFTADVEGVGHVCSFSVFDFQAYGNSKYGSPCDAPRNRRSSQGKMEKSFLSFQSTYQSWEPNIQGKQFLLNLKTLREQNLPGHGNRYASSPPKMGLGGPYLRRNGDRNLLISREMPRNTFKIGNHLDSLWPSDANQNNNLYILDCYYTSRPHHVPTEEPFEKTELHSREYWISSENEPGYDEYLREYSGDRAESHFGASTSAPFFREALLEGRRGSDLPESTKSQWWARSRPRGGQAQTSFFEPPDFNHQTFNYHDRLSDRCSDDQEQHLDWRDYRRLSRTTHTDDLEAGEFNLHFDDIYSRPPETPTFNPGTASL 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1395 854 PANTHER APG9 AUTOPHAGY 9 5 798 IPR007241 GO:0006914
Lele05g1395 854 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1395 Lele-ChrLele05 8811015 8816587 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1395 05 8811015 8816587 Lele13g1928 13 26901101 26904481 CCT
Lele05g1395 05 8811015 8816587 Lele14g1862 14 25233159 25239560 CCT
Lele05g1395 05 8811015 8816587 Lele15g0479 15 2810406 2814223 CCT
Lele05g1395 05 8811015 8816587 Lele16g0500 16 2767894 2771516 CCT
Lele05g1395 05 8811015 8816587 Lele05g1395 05 8811015 8816587 ECH
Lele05g1395 05 8811015 8816587 Lele07g1459 07 8869116 8874771 hybridization
Lele05g1395 05 8811015 8816587 Lele08g1248 08 7930128 7935596 hybridization