Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1248 ATGTTTATCAGACCAAGGGGTCCTAGTGTTTTTAACATATTCAAACGGAAGCGTCAAGACGAATCATCCCTGACAACAGGTTTGCTTCACGATGTTCCACCAGAGATTGAGTTGTCTGACTATGGAAGGATTCCAAGTCCAGGCAGTGAGAGCCCTTCAGGGCTTCTTAACGGTGAGAGTTTGAACATAGAGCCAATCTCTGATTTGGACCTCTTCTTTGAAAGGCTTTACAGCTACTACTGTGAGAAAGGGCTTTGGTGCATTATTATAAAGTGGATCGTGGAACTTCTTAGTCTAGGATTTACCATATGTTTCTCAGGATTTTTCTTATTATATGTTGATTGGAATGGACTTCGCATTGCAAAGTGTGGGATGGATGCAGTTGAATCTGGAATTAAGCCTTGTGATCTTGGTAAAGAAGCTATTCATCAACACCCTTTAACCCCACTAACACTCACAAAGGTTATTATCGTTGGGTATTTAGCAATATTTTCCATCTATTGGATATTCTGTTTCTTGAGGTTCTTTGCTCAACTAAAGGACATTCTGGAAATCCGTCACTTTTATTACAATAGTCTCCATGTTACTGACAATGAAATCCAAACCATGCCCTGGGCTACAATTCTTGAAAAGGTTGTTTTGGTGCAAAGTTCACGACAGCTCTGTGTGGTAAAGGATCTCTCTGCTCATGACATGGTGATGAGACTGATGCGGAAAGAAAACTACTTGATTGGAATGATCAACAAGGGAGTGCTTGCTTTCCCCATTTCTCAGTGGGTCCCAGGTGCTGGGCCTACAGTGAAATGTGGTCCTAATGGAACACGATATCGTCTTATACTAACCAAGACCCTCGAGTGGACTCTGAACTGGTGCATCCTGCAAAGCATGTTTGATCGAAACTTTTGTGTTAGAAGGGATTTTGTGTCCAACCCACAGACATTGAAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTTTCTCCTTTTCTTGTCATATTCATGTTGGTGTATCTCTTTCTGAGGCATGCTGAACAATTTTATAATCATCCAAGCACAGCATCATCTCGAAGGTGGTCAAATTTGTCAAGGTGGATCTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAAGCATCGGATAAGTAGCAGTGCAATACATGCTTCTGATTATCTCAAGCAATTTCCTTCACCTATTATATCAATCATTGCAAAGTTCATATCTTTCGTATCAGGTGGATTTGCTGCAATTCTGATCATCATTGCTTTTCTTGAGGAATCTCTGCTTGAGGGCCATATATTTGGTCGAAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACAGCTGTTAGCCGGTTTGCGGTGACAAATGAGCTTCTTGTTCTAGATCCTGAGGGAGCAATGTCTATGGTGGTTCAGCATACACACTATATGCCAAAAAGATGGCGTGGCAAAGAAAGTACTGAAATGGTCCGCATTGAGTTTGGAACACTATTTCAGTACACTGGGATGATGTTACTTGAGGAGATGGCATCAATTTTACTCACTCCATATTTGCTTTTATTTGTTGTCCCGAAGCGAGTCGATGATATTCTGCAGTTCATTGCGGATTTCACAGTGGATGTTGAAGGGGTTGGCCATGTTTGTAGTTTTAGTGTCTTTGATTTTCAAGCCCATGGAAACAGCAAGTATGGTTCCCCATGCGATGCATCTCGCAATAGAAGGAGTTCCCAGGGGAAGATGGAGAAATCATTTCTGAGCTTTCAGAGTACCTACCAATCATGGGAACCAAATATTCGGGGGAAGCAGTTTTTGCTGAATCTTAGAAGGTTGAGAGAGCAAAATTTACCAGGACATGGAAACAGATATTCGTCTTCCCCTCCTAAAATGTGGGGGGATGGTCCCTACCTGAGGAGTAATGGAAACAGAAACTTGTTCATATCCAGGGAAATGCCATATAATACTTTAAAAATTGGTAATCACTTGGGTTCATTGTGGCCAAGTGATGCTTATCAAAACAATAATCTTTATATTCTTGATTGTTACTATACTTCTCGACCTCATCATGTTCCAGCAGAACCATTTGAGAAAACTGAGCATTCCAGAGAGTATTGGATGTCCTCGGAGAATGAACCTGGGTATGATGAATACTTAAGAGATTATAGTGGGGATCGAGCTGAGTCTCATTTTGGGGCATCCACATCAGCTCCCTTTTTCAGGGAAGCTCTACTTGAAGATCGAAGGAGTAGTGATCTGCCAGAGTCGAGCAAGAGTCATTGGTGGGCTAGAAGTGGACCACATGGTGGGCAAGCGCAGGCAAGCTTTTTTGAGCCTCCAGATTTCAATCCCCAGACATTTAACTATCATGATAGGTTATCTGATAGATGTTCAGATGATCAAGAACAACACTTGGACTGGAGAGATTATCATAGATTATCTAGAACAACACACACAGATGACTTAGAGGCAGGGGAATTTAATCTTCATTTTGACGATATTTATAGCAGACCCCCAGAAACTCCCACTTTTAATCCAGGCACCGCAAGCCTTTGA 2559 0.4166 MFIRPRGPSVFNIFKRKRQDESSLTTGLLHDVPPEIELSDYGRIPSPGSESPSGLLNGESLNIEPISDLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRIAKCGMDAVESGIKPCDLGKEAIHQHPLTPLTLTKVIIVGYLAIFSIYWIFCFLRFFAQLKDILEIRHFYYNSLHVTDNEIQTMPWATILEKVVLVQSSRQLCVVKDLSAHDMVMRLMRKENYLIGMINKGVLAFPISQWVPGAGPTVKCGPNGTRYRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPQTLKKRLMVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVDHLFKHRISSSAIHASDYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAVSRFAVTNELLVLDPEGAMSMVVQHTHYMPKRWRGKESTEMVRIEFGTLFQYTGMMLLEEMASILLTPYLLLFVVPKRVDDILQFIADFTVDVEGVGHVCSFSVFDFQAHGNSKYGSPCDASRNRRSSQGKMEKSFLSFQSTYQSWEPNIRGKQFLLNLRRLREQNLPGHGNRYSSSPPKMWGDGPYLRSNGNRNLFISREMPYNTLKIGNHLGSLWPSDAYQNNNLYILDCYYTSRPHHVPAEPFEKTEHSREYWMSSENEPGYDEYLRDYSGDRAESHFGASTSAPFFREALLEDRRSSDLPESSKSHWWARSGPHGGQAQASFFEPPDFNPQTFNYHDRLSDRCSDDQEQHLDWRDYHRLSRTTHTDDLEAGEFNLHFDDIYSRPPETPTFNPGTASL 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1248 852 PANTHER APG9 AUTOPHAGY 9 5 791 IPR007241 GO:0006914
Lele08g1248 852 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1248 Lele-ChrLele08 7930128 7935596 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1248 08 7930128 7935596 Lele08g1248 08 7930128 7935596 ECH
Lele05g1395 05 8811015 8816587 Lele08g1248 08 7930128 7935596 hybridization
Lele06g1255 06 7984024 7989068 Lele08g1248 08 7930128 7935596 hybridization