Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0500 ATGTTTAGCAGACCAAGAGGCGCCAATGCTGTTGGTATATTCGAATCAATTCAAGGTGAATCGTCACTGACATCAGGTTTGCTTCTGAATGTTCCCCAAGAGCTTGAATTGTCTGGCTACGGAAGGATCCCAAGTCAAGGTAGTGAGATCCCTTCGGGGTTTCTTACTTGTGAGAGCTTAAATTTGGAGCAAATTGTTGATTTGGATCTCTTCTTCGAAAGGCTTTACAGTTACTACTGTGAGAAAGGGCTTTGGTGCATCATTGTGAAGTGGATTGTTGAACTTCTGAGTCTAGGTTTCACCATATGTTTTTCTGGATTCTTTTTACTATATGTTGATTGGAATGGGCTTCGCAATGCAAAGTGTGGGATGGATGCGGTTGAATCTGGAATCAAACCCTGTGATCTAGCAAAAGAAGCTCTTCGGCAACACCCCTTAACCCCACTGACACTTACTAAAGCTATTATTGTTGGATACTTGGGAATATTTTCCATCTATTGGATATTTTGTTTCTTCAGGTTCTTTACTCAACTAAAGGACACTCTGGAAATCCGTCAGTTTTACTACAATAGTCTTCATGTAACCGACAATGAAATTCAAACCATGCCTTGGGAAACAATCCTTGAGAAGGTTGTTTCAATACAACGTTCACAACAGCTCTGTTTGGTTAAGGATCTTTCTGCTCATGACATGGTGATGAGATTGATGCGGAAGGAAAACTACTTGATCGGAATGCTCAACAAGGGGGTGCTTGCATTTCCCGTTTCTCACTGGGTTCCTGGCGCTGGCCCTACAGTGAAATCTGGTCCTAATGGAACACAATGTCATCTAATACTTACCAAGATCCTTGAGTGGACTTTGAATTGGTGCATCTTACATAGCATGTTTGACCGAAACTTTTGTGTTAAGAGGGACTTTGTGTCTAATCCAAAGACATTAAAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTGCTTTCTCCATTTCTTGTCATATTCATGCTGGTATATCTCTTTCTGAGGCACGCTGAACAATTTTATAATCATCCGAGTACAGCTTCATCTCAAAGATGGTCAAATTTGTCTAGGTGGATGTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAATCATAGGATTAATAACAGTGTGATACACGCTTCTGAGTATCTGAAGCAATTTCCTTCACCTATAATATCTATAATTGCAAAGTTCATCTCTTTTGTCTCGGGTGGTTTCGCTGCAATTCTGATCATCATTGCTTTTCTTGAGGAATCATTGCTAGAGGGCCATATATTTGGTCGAAACTTATTTTGGTATGGTGCTGTTTTTGGAACAATAACTGCAATTAGCAGGGCCGTGGTTACAAATGAACTTCTGGTCTTAGATCATGAGGGAGCGATGTCGATGGTGGTTCAACATACTCATTATATGCCAAAGAGATGGCGAGGCAAAGAAAGTACTGAAATGGTTTGCCTCGAATTTGGAACATTGTTTCAGTATACAGGGATGATGTTACTTGAGGAGATTACCTCAATTTTTCTCACTCCATATTTACTTATGTTTGTTGTCCCAAAGCGGGTCAATGATATTTTGCGGTTCATTGCAGATTTCACAGTGAATGTTGAAGGTGTTGGCCATGTTTGCAGTTTCAGTGTCTTTGACTTTCGAGAGCATGGAAACAGCAATTATGGTTCCCCACACAATGCACCTCGCAGTCAGAGGAGTTCTCAGGGGAAGATGGAGAAATCATTTCTGAGCTTTCAGAGTAGTTATCCATCATGGGCACCAAATTCTCAAGGGAAGCAATTTTTGCTAAATCTTAGAACCTTCAGAGAGCAAAATTTGCAAGGACATGGAAACAGACGTGCATTTCCTCCTCCTAGGTTGTGCAAGGGCAGTTCCAATACTAGGAGCTATGGAGGCAGAAACAGGTTCACGTCCTGGGAAATGCCTTATGTATTTGGCAATCACTTGGGTTCGTTGTGGCTGATTGATGCCAACCAAAATAACCATCCTTATCTTCTAGACTGGTATTATACATCTCGACCTCATGATGCAACTATGAGAGAAGTTCCGACAGAACCATTTGAAGAAACTGAGTTTAGTTTGGGAGATTATCCCCTGCCCTCCAACTTGACTTGTAATGTCCCTTGCTATGAAGAATGCCATGAAGATCGGTCGGCATCTCATCTTGGGGCTTCCACGTTGGCTCCCATCTTCAGGGAAAGCCTAATTCAAGATCATAATTTTGCTGATCAGTCCCACTTTATCAGAAATCACTGGTGGGCGAGAAGCGGCCCACAGGTTGGACAAGCTCAGACAAGTTTTTTTGAGCCTCCAGATTTTAATTACGGAACATCTTGGAATTATGATGATAAGTTTTCAGATAGAAGCTTGGAGGATCCAGAACAAGACTTGGACTGGAGAGACTATCAAAGATTAGCTAAAACAACTTGCCCAGATGACTTAGAGACAAGGGAGTTTAAATTTCACTTTGATGATATCTATAGCAAACCTTCACAAATGGACACTGTTAATCCAAATACCGCAAGCTTTTGA 2565 0.4133 MFSRPRGANAVGIFESIQGESSLTSGLLLNVPQELELSGYGRIPSQGSEIPSGFLTCESLNLEQIVDLDLFFERLYSYYCEKGLWCIIVKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLAKEALRQHPLTPLTLTKAIIVGYLGIFSIYWIFCFFRFFTQLKDTLEIRQFYYNSLHVTDNEIQTMPWETILEKVVSIQRSQQLCLVKDLSAHDMVMRLMRKENYLIGMLNKGVLAFPVSHWVPGAGPTVKSGPNGTQCHLILTKILEWTLNWCILHSMFDRNFCVKRDFVSNPKTLKKRLMVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSQRWSNLSRWMFREFNEVDHLFNHRINNSVIHASEYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYGAVFGTITAISRAVVTNELLVLDHEGAMSMVVQHTHYMPKRWRGKESTEMVCLEFGTLFQYTGMMLLEEITSIFLTPYLLMFVVPKRVNDILRFIADFTVNVEGVGHVCSFSVFDFREHGNSNYGSPHNAPRSQRSSQGKMEKSFLSFQSSYPSWAPNSQGKQFLLNLRTFREQNLQGHGNRRAFPPPRLCKGSSNTRSYGGRNRFTSWEMPYVFGNHLGSLWLIDANQNNHPYLLDWYYTSRPHDATMREVPTEPFEETEFSLGDYPLPSNLTCNVPCYEECHEDRSASHLGASTLAPIFRESLIQDHNFADQSHFIRNHWWARSGPQVGQAQTSFFEPPDFNYGTSWNYDDKFSDRSLEDPEQDLDWRDYQRLAKTTCPDDLETREFKFHFDDIYSKPSQMDTVNPNTASF 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0500 854 Pfam Autophagy protein ATG9 62 556 IPR007241 GO:0006914
Lele16g0500 854 MobiDBLite consensus disorder prediction 619 638 - -
Lele16g0500 854 PANTHER APG9 AUTOPHAGY 9 5 796 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0500 Lele-ChrLele16 2767894 2771516 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1395 05 8811015 8816587 Lele16g0500 16 2767894 2771516 CCT
Lele13g1928 13 26901101 26904481 Lele16g0500 16 2767894 2771516 hybridization
Lele14g1862 14 25233159 25239560 Lele16g0500 16 2767894 2771516 hybridization