Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0479 ATGTTTATCATACCAAGAGGTGCCAGTTCTTTTGGTATATTCAAATCAAAATTTCAAGGTGAATCGTCACTGACATCAGGTTTGCTTCTGGATGTTCCCCCAGAGCTTGAATTGTCTGGCTGCGGAAGGATCCCGATTCAAGGTACTGGTGAGAGCTTAAATGTGGAGCCAATTGTTGATTTGGATCTCTTCTTCGAAAGGCTCTACAATTACTACTGTGAGAAAGGGCTTTGGTGCATCATTGTGAAGTGGATTGTTGAACTTTTGAGTCTAGGTCTTACCATATGTTTTTCTGGATTCTTTTTACTATATGTTGATTGGAATGGGATTCGCAATGCCAAGTGTGGGATGGATGCAGTTGAATCTGGAACCAAACCCTGTGATCTAGCAAAGGAAGCTCTTCGGCAACACCCCTTAACCCCACTGATACTTACTAAAGCTATTGTTGTGGGATACTTGGGAATATTTTCCTTCTATTGGATATTTTGTTTCTTGAGGTTCTTTACTCAGCTAAAGGACACTCTGGAAATCAGTCAGTTTTACTACAATAGTCTTCATGTAAGCGACAATGAAATTCAAACCATGCCTTGGGAAACAATTCTTGAGAAGGTTGTTTCAATTCAAAGCTCGCAACAGCTCTGTTTGGTTAAGGATCTTTCTGCTCATGACATGGTGATGAGATTGATGCGGAAGGAAAACTACTTGATCGGAATGCTCAACAAAGGGGTGCTTGCATTTCCCATTTCTCACTGGGTTCCCGGTGCTGGCCCTACAGTGAAATCTGGTCCTAATGGAACACAATGTCGTCTAATGCTTACCAAGACCCTAGAGTGGACTTTGAATTGAAACGTTTGTGTTAAGAGGGACTTTGTGTCTAATCCAAAGACAATAAAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTTTCTCCATTTCTTGTCATATTCGTGCTGGTATATCTCTTTCTGAGGCACGCTGAACAATTTTATAATCATCCAAGTACAGCTTCATCTCGAAGATGGTCAAATTTGTCTAGGTGGATATATTTGGTCGAAATATTTTGGTACGGTGCTGTTTTTGGAACAATAACTGCAATTAGCAGGGCTGTGGTTGCGAATGAGCTTTTGGTCCTAGATCCTGTGGGAGCGATGTCGATGGTGGTTCAGCATACTCATTATATGCCAAAGAGATGGCGAGGCAAAGAAAGTACTGAAATGGTTCGCCTCGAATTTGGAACCTTGTTTCAGCGGCTCGAAGATATTTTGCAGTTCATTGCAGATTTCACAGTGGATGTTGAAGGTGTTGGCCATGTTTGCAGTTTCAGTGTCTTTGACTTTCGAGAGCATGGAAACAGCAATTATGGTTCCCCGCATAATACGCCTCGCAGTCAGAGGAGTTCTCAGGGGAAGATGGAGAAATCACTTTTGAGGTTTACAAGAAGCCTTTACCACTGCTAGAAGTTCCAACAGAGTGAAGGAACTGAGTTTCGTTTGGGTGAGTATCCACTGCCCTCCAACTTGACTCGGAACGTGCCTGGCTATGAAGAATACCATGAAGATCGGTCGGCATCTCATCTTGGGGCTTCCACGTTGGCTCCCATCTTCAGTGAAAGCCTAATTCAAGATCATAATTTTACTGATCAGTCCCACCCTATCAGAAATCACTGGTGGGCGAGAAGCGGCCCACAGGTTGGACAAGCTCAGACAAGCTTTTTTGAGCCTCCAGATTTTAATTACCGAACATCATGGAATTATTATGATAAGTTTTCTGACAGAAGCCTGGAGGATCCGGCACAAGACTTGGATTGGAGAGACTATCAAAGATTAGCTAAAACAACTTTCCCAGATGACTTAGAGAGAAGGGACTTTAAATTTCATTTTGATATCTATAGCAAACCTCCAAAAATGGACACTGTTAATCCAAACGCTGCAAGCTTTTGA 1947 0.4237 MFIIPRGASSFGIFKSKFQGESSLTSGLLLDVPPELELSGCGRIPIQGTGESLNVEPIVDLDLFFERLYNYYCEKGLWCIIVKWIVELLSLGLTICFSGFFLLYVDWNGIRNAKCGMDAVESGTKPCDLAKEALRQHPLTPLILTKAIVVGYLGIFSFYWIFCFLRFFTQLKDTLEISQFYYNSLHVSDNEIQTMPWETILEKVVSIQSSQQLCLVKDLSAHDMVMRLMRKENYLIGMLNKGVLAFPISHWVPGAGPTVKSGPNGTQCRLMLTKTLEWTLNXNVCVKRDFVSNPKTIKKRLMVVGLAMLLLSPFLVIFVLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIYLVEIFWYGAVFGTITAISRAVVANELLVLDPVGAMSMVVQHTHYMPKRWRGKESTEMVRLEFGTLFQRLEDILQFIADFTVDVEGVGHVCSFSVFDFREHGNSNYGSPHNTPRSQRSSQGKMEKSLLRFTRSLYHCXKFQQSEGTEFRLGEYPLPSNLTRNVPGYEEYHEDRSASHLGASTLAPIFSESLIQDHNFTDQSHPIRNHWWARSGPQVGQAQTSFFEPPDFNYRTSWNYYDKFSDRSLEDPAQDLDWRDYQRLAKTTFPDDLERRDFKFHFDIYSKPPKMDTVNPNAASF 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0479 648 Pfam Autophagy protein ATG9 354 418 IPR007241 GO:0006914
Lele15g0479 648 Pfam Autophagy protein ATG9 55 350 IPR007241 GO:0006914
Lele15g0479 648 PANTHER APG9 AUTOPHAGY 9 419 483 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0479 Lele-ChrLele15 2810406 2814223 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1395 05 8811015 8816587 Lele15g0479 15 2810406 2814223 CCT
Lele13g1928 13 26901101 26904481 Lele15g0479 15 2810406 2814223 hybridization
Lele14g1862 14 25233159 25239560 Lele15g0479 15 2810406 2814223 hybridization