Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1928 ATGTTTAGCATAACAAGAGGTGCCAGTTCTTTTTGTATATTCAAATCAAAATTTCAAGGTGAATCGTCACTGACATCAGGTTTGCTTATGAGTGTTGATTGGAATGGGCTTCGGAATGCCAAGTGTGGGATGGATGCAGTTGAATCTGGAATCAAACCCTGTGATCTAGCAAAGGAAGCTCTTCGGCAACACCCCCTAACCCCACGGACACTTACTAAAGCTATTATTGTAGGATACTTGGGAATATTTTCCTTCTATTGGATATTTTGTTTCTTAAGGTTCTTTACTCAGCTAAAGGACACTCTTGAAATCCGTCAGTTTTACTACAATAGTCTTCATGTAAGCGACAATGAAATTCAAAGCATGCCTTGGGAAACAATCCTTGAGAAGGTTGTTTCAATACAAAGCTCGCAACAGCTCTGTTTGGTTAACGATCTTTCTGCTCATGACATGGTGATGAGATTGATGCGGAAGGAAAACTACTTGATTGGAATGCTCAACAAGGGGGTGCTTGCATTTCCCATTTCTCACTGGGTTCCCGATGCTGGCCCTACAGTGAAATCTGGCCCTAATGGAACACAATGTCGTCTAATGCTTACCAAGACCCTAGAGTGGACTTTGAATTGAAACTTTTGTGTTAAGAGGGACTTTGTGTCTAATCCAAAGACATTAAAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTTTCTCCATTTCTTGGCATATTCATGCTGGTGGACCATCTCTTCAAGGATCGGATTAATAACATTGTGATACATTCTTCTGAGTATCTGAAACAATTTCCTTCACCTATAATATCTATAATTGCAAAGTTCGTCTCTTCTGTCTCGGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTCTTGAGGAATCATTGCTAGAGGGCCATATATTTGGTCAAAACTTATTTTGGTACGGTACTGTTTTTGGAACAATAACTGCAATTAGCAGGGCTGTGGTTGCGAATGAGCTTCTGGTCCTAGATCCTGAGGGAACGATGTCAACGGTGGTTCAACATACTCATTATATGCCAAAGAGATGGCAAGGCAAAGAAAGTATTGAAATGGTTCTCATCGAATTTGGAACAATGTTTCAGCGGCTCAATGATATTTTGCAGTTCATTGCAGATTTCACAGTGGATGTTGAAGGTGTTGGCCATGTTTGCAGATGGTTTTGTTGTTTTATTGTCCTCTTTATTGTTGCAGTTTCAGTGTCTTTGACTTTCGAGAGTATGGAAACAGCAATTATGGTTCCCCGCATAATACACCTCGCAGTCAGAGGAGTTCTCAGGGGAAGATGGAGAAATCACTTTGAGAGTAGTTATCCATCATGGGCACCAAATTCTCAAGGGAAGCAATGTTTGCTAAATCTTAGAACCTTCAGAGAGCAAAATCTGCAAGGACATGGAAACAGACGTGCATTCCCTCCTCCTAGGTTGTGCAAGGATAGTTCCAACACTAGGAGCTATGGAGGCAGAAACAGGTTTACGTCCTGGGAAATGCCATGTGTATTTGGCAATCACTTGGGTCGGTTGTGGCTGATTGATGCCAACCAAAGTAACCGTCCTTATCTTCTAGATTGGTATTATACATCTCAACCCCATGATGCAACTATGAGAGAAGTTCCAACGGAACCATTTGAAGAAACTGAGTTTCGTTTGGGTGAGTATCCACTGCCCTCCAACTTGACTTGGAACGTGCCTGGCTATGAAGAATACAATGAAGATCGGTCGGCGTCTCATCTTGGGGCTTCCACTTTGGCTCCCATCTTCAGGGAAAGCCTAATTCACGATCATAATTTTACTGATCAGTCCCACCCTATCAGAAATCACTGGTGGGCGAGAAGCATCCCACAGCTTGGACAAGCTCAGACAAGCTTTTTTGAGCCTCCAGATTTTAATTCCTGA 1938 0.4216 MFSITRGASSFCIFKSKFQGESSLTSGLLMSVDWNGLRNAKCGMDAVESGIKPCDLAKEALRQHPLTPRTLTKAIIVGYLGIFSFYWIFCFLRFFTQLKDTLEIRQFYYNSLHVSDNEIQSMPWETILEKVVSIQSSQQLCLVNDLSAHDMVMRLMRKENYLIGMLNKGVLAFPISHWVPDAGPTVKSGPNGTQCRLMLTKTLEWTLNXNFCVKRDFVSNPKTLKKRLMVVGLAMLLLSPFLGIFMLVDHLFKDRINNIVIHSSEYLKQFPSPIISIIAKFVSSVSGGFAAILIIIAFLEESLLEGHIFGQNLFWYGTVFGTITAISRAVVANELLVLDPEGTMSTVVQHTHYMPKRWQGKESIEMVLIEFGTMFQRLNDILQFIADFTVDVEGVGHVCRWFCCFIVLFIVAVSVSLTFESMETAIMVPRIIHLAVRGVLRGRWRNHFESSYPSWAPNSQGKQCLLNLRTFREQNLQGHGNRRAFPPPRLCKDSSNTRSYGGRNRFTSWEMPCVFGNHLGRLWLIDANQSNRPYLLDWYYTSQPHDATMREVPTEPFEETEFRLGEYPLPSNLTWNVPGYEEYNEDRSASHLGASTLAPIFRESLIHDHNFTDQSHPIRNHWWARSIPQLGQAQTSFFEPPDFNS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1928 645 PANTHER APG9 AUTOPHAGY 9 447 644 IPR007241 GO:0006914
Lele13g1928 645 Pfam Autophagy protein ATG9 248 376 IPR007241 GO:0006914
Lele13g1928 645 Pfam Autophagy protein ATG9 28 248 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1928 Lele-ChrLele13 26901101 26904481 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1395 05 8811015 8816587 Lele13g1928 13 26901101 26904481 CCT
Lele13g1928 13 26901101 26904481 Lele15g0479 15 2810406 2814223 hybridization
Lele13g1928 13 26901101 26904481 Lele16g0500 16 2767894 2771516 hybridization