Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0946 ATGTCAGGCATGTACAGAGAGCGTGTTGTTGGTTCCATTTCCAAATCGGAGGATCGGAAACGAATCAATGAGGTCCTTGATAAGCAGCTTGAGCGTTCATCACCTTCCACTTCAAGACCCATTAACCCTAAAGATAGAGATATTAGGTCTTCCCTTAATTCTTCTAATATCTCCAAAAATTCCAATGTTTCAGAGGAATCTGAAACAGACAGTGAAGAGTCAGATGTCAGTGGTTCTGATGGAGATGACACATCTTGGATCTCATGGTTCTGCAATCTGAGAGGAAACGAGTTCTTTTGCGAGGTTGATGATGATTACATCCAAGACGACTTTAACCTCTGTGGATTAAGCAGTCAAGTGCCTTACTATGATTATGCTCTTGATTTAATTTTGGATGTCGAGTCTTCCCATGGTGACATGTTCACAGAGGAACAAAATGAGTTAATTGAATCGGCAGCGGAGATGCTTTACGGTCTGATTCATGCCCGATATGTATTGACAAGCAAGGGAATGGCTGCCATGCTCGACAAGTACAAAAACTATGATTTTGGTAGATGCCCGAGAGTTTATTGTTCTGGACAACCCTGCCTTCCAGTTGGCCAGTCAGACATTCCTAGGTCAAGCACCGTGAAAATATATTGCCCTAGGTGTGAAGACCTTTACTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACAACATTTCCACATCTCTTCTTGATGACATATGGACAACTAAAACCACAGAAGCCATCACAGAGCTATGTTCCTAGAGTTTTTGGGTTCAAAATTCACAAGCCATGA 819 0.4212 MSGMYRERVVGSISKSEDRKRINEVLDKQLERSSPSTSRPINPKDRDIRSSLNSSNISKNSNVSEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARYVLTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQSYVPRVFGFKIHKP* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0946 272 ProSitePatterns Casein kinase II regulatory subunit signature. 186 217 IPR000704 GO:0005956|GO:0019887
Lan6g0946 272 MobiDBLite consensus disorder prediction 29 64 - -
Lan6g0946 272 Pfam Casein kinase II regulatory subunit 85 268 IPR000704 GO:0005956|GO:0019887
Lan6g0946 272 Gene3D - 183 257 - -
Lan6g0946 272 SUPERFAMILY Casein kinase II beta subunit 83 271 IPR035991 GO:0005956|GO:0019887
Lan6g0946 272 SMART CK_II_beta_2 85 268 IPR000704 GO:0005956|GO:0019887
Lan6g0946 272 PANTHER CASEIN KINASE II SUBUNIT BETA-2 4 271 - -
Lan6g0946 272 MobiDBLite consensus disorder prediction 1 81 - -
Lan6g0946 272 PRINTS Casein kinase II regulatory subunit family signature 85 101 IPR000704 GO:0005956|GO:0019887
Lan6g0946 272 PRINTS Casein kinase II regulatory subunit family signature 102 116 IPR000704 GO:0005956|GO:0019887
Lan6g0946 272 PRINTS Casein kinase II regulatory subunit family signature 157 178 IPR000704 GO:0005956|GO:0019887
Lan6g0946 272 PRINTS Casein kinase II regulatory subunit family signature 182 203 IPR000704 GO:0005956|GO:0019887
Lan6g0946 272 PRINTS Casein kinase II regulatory subunit family signature 204 225 IPR000704 GO:0005956|GO:0019887
Lan6g0946 272 PRINTS Casein kinase II regulatory subunit family signature 232 249 IPR000704 GO:0005956|GO:0019887
Lan6g0946 272 MobiDBLite consensus disorder prediction 11 28 - -
Lan6g0946 272 PANTHER CASEIN KINASE II SUBUNIT BETA 4 271 IPR000704 GO:0005956|GO:0019887
Lan6g0946 272 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 78 182 IPR016149 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0946 Lan-Chr6 8863576 8867676 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0946 K03115 - gmx:100793573 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0946 6 8863576 8867676 Lan17g0974 17 13754699 13763395 LSH
Lan17g0394 17 2934176 2936809 Lan6g0946 6 8863576 8867676 PCT
Lan18g0373 18 7005208 7009377 Lan6g0946 6 8863576 8867676 PCT
Lan6g0320 6 2487271 2490051 Lan6g0946 6 8863576 8867676 PCT