Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0320 ATGCACAATCACAAGGACCGATATAAAAGAGGTTTTCCCTCCAAATCAGAGCTAGATCGTAAACGAATCACCGATCTCATTGATCGATCCTCACCGTCCACATCCAAGGCAATCAACGGTGGTTCCTCCGCTAAGTCTTCTTCTCTCACTAACAGGGACTCTCGTTCCTCCTCTAACCCTATCTCCAAATATTCCAACGCTGAAGAAGATGAAGAATCTGAAACAGATAGCGATGATTCAAATGGTAGAGGTTCTGATGGTGATGACACGTCATGGATTTCATGGTTTTGCAATTTGAGAGGGAATGAATTCTTTTGTGAGGTTCATGATGATTATATACAAGATGATTTTAACTTATGTGGATTAACCAGCCAAGTTCCTTATTATGATTATGCCCTTGATTTAATTTTGGATGTTGAATCCTCCCATGGTGACATGTTTACGGAGGAACAGAATGAGTTAATTGAATCAGCCGCAGAGATGCTTTATGGTCTCATTCATGCTCGGTTCATATTGACAAGCAAAGGAATGGCTTCGATGCTGGACAAGTATAAGAACTATGATTTTGGCAGATGCCCAAGAGTTTACTGCTCTGGACAACCCTGCCTTCCTGTGGGTCAGTCAGATATTGCTCGGTCAAGTACTGTGAAAATATTTTGCCCAAGGTGTGAAGACATTTACTATCCTCGCTCCAAGTATCAAGGCAACATTGATGGTGCATACTTCGGAACTACGTTTCCCCACCTCTTCCTGATGACTCATGGACAACTGAAGCCACAGAAACCATCACAGAACTATGTTCCGAGAGTTTTTGGCTACAAACTTCACAAACCACGTAGCTGA 843 0.4235 MHNHKDRYKRGFPSKSELDRKRITDLIDRSSPSTSKAINGGSSAKSSSLTNRDSRSSSNPISKYSNAEEDEESETDSDDSNGRGSDGDDTSWISWFCNLRGNEFFCEVHDDYIQDDFNLCGLTSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARFILTSKGMASMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIARSSTVKIFCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTHGQLKPQKPSQNYVPRVFGYKLHKPRS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0320 280 PANTHER CASEIN KINASE II SUBUNIT BETA 6 277 IPR000704 GO:0005956|GO:0019887
Lan6g0320 280 Pfam Casein kinase II regulatory subunit 91 274 IPR000704 GO:0005956|GO:0019887
Lan6g0320 280 ProSitePatterns Casein kinase II regulatory subunit signature. 192 223 IPR000704 GO:0005956|GO:0019887
Lan6g0320 280 PANTHER CASEIN KINASE II SUBUNIT BETA-2 6 277 - -
Lan6g0320 280 MobiDBLite consensus disorder prediction 10 27 - -
Lan6g0320 280 PRINTS Casein kinase II regulatory subunit family signature 91 107 IPR000704 GO:0005956|GO:0019887
Lan6g0320 280 PRINTS Casein kinase II regulatory subunit family signature 108 122 IPR000704 GO:0005956|GO:0019887
Lan6g0320 280 PRINTS Casein kinase II regulatory subunit family signature 163 184 IPR000704 GO:0005956|GO:0019887
Lan6g0320 280 PRINTS Casein kinase II regulatory subunit family signature 188 209 IPR000704 GO:0005956|GO:0019887
Lan6g0320 280 PRINTS Casein kinase II regulatory subunit family signature 210 231 IPR000704 GO:0005956|GO:0019887
Lan6g0320 280 PRINTS Casein kinase II regulatory subunit family signature 238 255 IPR000704 GO:0005956|GO:0019887
Lan6g0320 280 Gene3D - 189 263 - -
Lan6g0320 280 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 84 188 IPR016149 GO:0005956|GO:0019887
Lan6g0320 280 SUPERFAMILY Casein kinase II beta subunit 89 278 IPR035991 GO:0005956|GO:0019887
Lan6g0320 280 MobiDBLite consensus disorder prediction 1 86 - -
Lan6g0320 280 SMART CK_II_beta_2 91 274 IPR000704 GO:0005956|GO:0019887
Lan6g0320 280 MobiDBLite consensus disorder prediction 28 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0320 Lan-Chr6 2487271 2490051 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0320 K03115 - gmx:100799304 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0394 17 2934176 2936809 Lan6g0320 6 2487271 2490051 LSH
Lan18g0373 18 7005208 7009377 Lan6g0320 6 2487271 2490051 LSH
Lan6g0320 6 2487271 2490051 Lan6g0946 6 8863576 8867676 PCT
Lan6g0320 6 2487271 2490051 Lan17g0974 17 13754699 13763395 PCT
Lan18g0373 18 7005208 7009377 Lan6g0320 6 2487271 2490051 PCT