Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0931 ACAGCCACTAGTTCCCGGAAGAGAGGAAGAGAAGCTGCGGTGGCCGGAGTTAACCAAATGGACCCTAACTTTGTTAATCCATTATTCTCTTTGCAATCTCAATCTCAACCTCCTCAACAGCATAATGCAGTCTCAACTGGCTTAGCTTTATCCTTCGGTGATCAACATCAACAATTGCATAACCTACCACAACATAGTTCTCACTCTTCTCCTTTCTTTTCTCATTTTTCTCAACTCCGGAATTCTCAAATCAAACAACACAAAGATGATATCGACCAATTCCTTCAAGCCCAGGGAGAAGAATTGAGGCATGAATTAGCGGCAAAGAGACAGAAACATTATCAGACACTCCTAAACGCAGCGGAAGAATCAGTTGCACGACGGTTAAGAGAAAAAGAAGCGGAGGTAGAGAAAGCCACTCGCAAGAAAGCAGAGTTAGAGGCACGCGCGGCTCAACTTATCGTGGAAGCGAAGATTATGCAAGCCAGAGTGAAAGCACATGAAGCAACTGCAGCTTCGTTACAGGCACAACTACATCACGCTATTGTGATGAGTCACGAAAAGAGCGTGGTAGTTGAAGATGCTGAGTCAGCTGAGGATGCTGACTCAGCTTATGTTGACCCGGGTCGGGTCATGGTGTCGGGTCCGAAATGTAGAGGTTGTGATATACGGGTTGCGTCGGTGGTGGTTTTACCTTGTCGACACTTATGCGTGTGCATAGAATGTGAAAACCATTTTCGGGCATGCCCCGTTTGCCTCACCGTTAAAAGTTCATCCATTGAAGTTTGTCTATCTTAG 798 0.4574 TATSSRKRGREAAVAGVNQMDPNFVNPLFSLQSQSQPPQQHNAVSTGLALSFGDQHQQLHNLPQHSSHSSPFFSHFSQLRNSQIKQHKDDIDQFLQAQGEELRHELAAKRQKHYQTLLNAAEESVARRLREKEAEVEKATRKKAELEARAAQLIVEAKIMQARVKAHEATAASLQAQLHHAIVMSHEKSVVVEDAESAEDADSAYVDPGRVMVSGPKCRGCDIRVASVVVLPCRHLCVCIECENHFRACPVCLTVKSSSIEVCLS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0931 265 ProSiteProfiles Zinc finger RING-type profile. 218 252 IPR001841 -
Lan18g0931 265 Gene3D - 227 253 - -
Lan18g0931 265 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 3 264 - -
Lan18g0931 265 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 3 264 IPR017066 -
Lan18g0931 265 Gene3D - 69 100 - -
Lan18g0931 265 Gene3D Death Domain, Fas 101 226 IPR011029 -
Lan18g0931 265 Pfam Zinc finger, C3HC4 type (RING finger) 217 255 - -
Lan18g0931 265 Coils Coil 122 177 - -
Lan18g0931 265 PIRSF SBP1_RNase_bind 2 265 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0931 Lan-Chr18 14539324 14540498 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0931 K19042 - gmx:100779548 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0387 17 2892582 2894552 Lan18g0931 18 14539324 14540498 LSH
Lan18g0931 18 14539324 14540498 Lan6g0318 6 2478236 2479808 LSH
Lan18g0931 18 14539324 14540498 Lan6g0938 6 8797668 8799290 PCT
Lan18g0931 18 14539324 14540498 Lan17g0981 17 13834658 13836343 PCT
Lan6g0938 6 8797668 8799290 Lan18g0931 18 14539324 14540498 PCT
Lan17g0981 17 13834658 13836343 Lan18g0931 18 14539324 14540498 PCT