Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0394 ATGAAGTTATTTCACAAACCCTCTAAAGTCCAATCTCTGATTAACTTCATTCTAGTAATCTCTTCATTCTGTGGCCTTTATGTCCTTGCATCAGTGCTACTCTTGGGCACATCAAAGTTAGTATATGTGCATTCTTCTTCATCACAAGATGTGTCCACACCACCACCAACAACAACAACAACAACCCTTGATCATCTTGTGTTTGGAATTGCTTCAAGTAAGAGATCATGGCCTAAAAGGAAGGAGTATGTTAAGCTTTGGTGGCAACCCAATAATGCAATGAAAGGATGTGTATTTGTAGATAGCATCCCAGATGAAAAAGGCCATGTTGAAAATGATACTTCTTCTCTTCCTCCTCTATGTGTCTCTCAAAACACTTCACACTTTCGCTACACTTGCAAAGGGGGTCTAAGATCAGCAATCCGTGTAGCACGTGTTGTTGCTGAGACTGTAGCATTGAATCATTCAGATGTAAGATGGTATGTTTTTGGAGATGATGACACTGTTTTCTTCCCAGAGAATGTGGTGAAAACACTGTCCAAATATGATCATGAGCTTTGGTACTATATTGGTGCACACTCTGAGGTGTATGAGCAGAACAGGTTGTTTGGTTTTGGAATGGCCTTTGGTGGTGCAGGTTTTGCTATCAGTTCCTCTCTTGCAAAAGTCCTGGTCAAGGTTTTTGATTCTTGTATAGAAAGGTATCCACATCTCTATGGAAGTGATGGCAGGGTGTACTCTTGCTTAGCTGAGCTTGGTGTAGGATTAACACATGAACCAGGTTTTCATCAGGTTGATTTGAAGGGAAATGCTTTTGGTCTATTGGCTGCACATCCAGTAACTCCCTTGTTGTCCCTGCATCACCCGGATTACACCGATCCAATCTTTCCAAACATGACAACTTCACAAGCTTTGAAGCATTTATTTAAAGTTGTGAATGTTGATTCCCAGAGGGTTCTACAACAAACAATTTGCTATGATAGATGGTTTTCATGGACAATTTCAGTGTCATGGGGCTACGCTATTCAGGTTTTCCCCAACCATATGTTTTTGCCAGATGTTCTGAGCGTGCAAGAAACATTCAAGCAGTGGAGGAAAGGGAACATGTTGGCAAAATCATATACTTTCAACACGAAAGAACCTCACCGGGACCCTTGTAGAAGATCAACCATTTTCTATCTAGACAATGTGTCTTCTGGTAAGGATGCCATCATAACCAGTTATAAGAGATCTTTTCAAAATTGCTCAAATGATGTGGCATCGCCGAGAAAATTGGAAGGGATCAGAGTGATCTCAGATAAGCTAAACCTTGACATTAAACAGTTGCAGGCTCCAAGAAGGCACTGTTGTGATGTATTGCCCTCTAGTGCACATGACCAACTAGAAATTGCTATCAGAGAATGCAAAGATGAAGAATTGATTCACATGCACTGA 1434 0.4093 MKLFHKPSKVQSLINFILVISSFCGLYVLASVLLLGTSKLVYVHSSSSQDVSTPPPTTTTTTLDHLVFGIASSKRSWPKRKEYVKLWWQPNNAMKGCVFVDSIPDEKGHVENDTSSLPPLCVSQNTSHFRYTCKGGLRSAIRVARVVAETVALNHSDVRWYVFGDDDTVFFPENVVKTLSKYDHELWYYIGAHSEVYEQNRLFGFGMAFGGAGFAISSSLAKVLVKVFDSCIERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLKGNAFGLLAAHPVTPLLSLHHPDYTDPIFPNMTTSQALKHLFKVVNVDSQRVLQQTICYDRWFSWTISVSWGYAIQVFPNHMFLPDVLSVQETFKQWRKGNMLAKSYTFNTKEPHRDPCRRSTIFYLDNVSSGKDAIITSYKRSFQNCSNDVASPRKLEGIRVISDKLNLDIKQLQAPRRHCCDVLPSSAHDQLEIAIRECKDEELIHMH 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0394 477 Pfam Protein of unknown function, DUF604 199 450 IPR006740 -
Lal9g0394 477 Gene3D - 53 309 - -
Lal9g0394 477 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 9 475 - -
Lal9g0394 477 PANTHER FRINGE-RELATED 9 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0394 Lal-Chr9 2616792 2619932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0394 10 442 Glycosyltransferase AT1G05280 54.318 1.97e-168 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0394 - - gmx:100784602 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0394 9 2616792 2619932 Lal9g0394 9 2616792 2619932 ECH
Lal2g0427 2 2552191 2557395 Lal9g0394 9 2616792 2619932 LSH
Lal9g0394 9 2616792 2619932 Lal25g0036 25 255670 257323 PCT
Lal9g0394 9 2616792 2619932 Lal10g1293 10 18988542 18990156 PCT
Lal9g0394 9 2616792 2619932 Lal8g0050 8 424835 427065 PCT