Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0036 ATGCTGTTACTTCATAAAATCACCAAAACCCAATCTTTGAAAAATATCATTGTACTCATCTTCTCTTCATTTTGTGGCACGTATGTCCTTGTATCATTGCTACTCCTAGGGACATCTAAGTTATTGAATGTGCACTCTTCATTAGAAGATGTGTTTGAACCAACCACTCTTGATCATCTTGTGTTTGGAATTGCTTCAAGTAAGGCTTCATGGCCTAAAAGGAAGGAATATGCCAAATTATGGTGGGAACCCAATAACAACAAAATGAGAGGATGTGTATTTGTGGATAGCATCCCTCCAAAAAAAGATCATACTAGTAATGTTACACCTCTTCCTCCTCTATGTATTTCAGAAGATACTTCTCGATTTCGATACACATTTCGAAATGGTCTAAGATCAGCAATTCGTGTGGCACGTGTCGTGAAAGAGACTATAGCGATGAATCATTCTGATGTTAGATGGTATGTTTTTGGAGATGATGATACAATTTTCTTTCCGGCAAATATAGTGAAAACTCTTTCCAAATATGATCATAGGCTTTGGTACTATGTTGGTGCAAATTCAGAAAGTTGTAGGCAAGACTGGTTTTTTAGTTTTGGAATGGCTTATGGTGGAGGTGGTTTTGCTATAAGTTCCTCTCTAGCAAAAGTCTTGGCAAAAGTTTTTGATTCATGTATTGAAAGGTATCCTCATCTCTATGGAAGTGATGGTAGAGTGTATTCTTGCATAACAGAACTTGGTGTTACATTAACACTTGAACCAGGTTTTCATCAGGTTGATCTGAAGGGAAATATCTTTGGCCTATTAGCTGCACATCCAGTAACTCCATTGTTATCCTTGCATCACCTTGACTCCACAAATCCAATATTTCCAAACATGACAACTACAAAATCCTTGCAACATTTATTTGAAGCTGCAAATGTTGATTCCCAGAGAATGCTACAACAAACAGTTTGCTATCACAAGCAATTTTCATGGACTATTTCAGTTTCATGGGGCTATGTTGTACAAATATTCCCAAACCATGTGTCTTTGCCAGATGTTCTTCAAGTGCAAGAAACATTCAAAGAATGGAAACCCAAAAATGATTTGGCGGGTGCATATACTTTCAACACAATACCATTTCACCATGACCCATGTAAAAGGCCCATCACTTTTTACCTAGACAAAGTGTCTTCTGGTAAAGATGGCATTACCATAAGCAGTTATAGAAAATCTTTCCAAAATTGCTCTTATAAAATGGCATCATTACAGCAAATGGAAGTGATTAAAGTGTTTACAAATAAGCTAGACCTTAGCATAAAGCAGTTGCAGGCCCCAAGAAGACATTGTTGTGATATATTGCCCTCTCGACTTCATGACCAAATGGAAATTACGACAAGAGAATGCAAAGATGATGAATTGATTTACATGGACTAA 1419 0.37 MLLLHKITKTQSLKNIIVLIFSSFCGTYVLVSLLLLGTSKLLNVHSSLEDVFEPTTLDHLVFGIASSKASWPKRKEYAKLWWEPNNNKMRGCVFVDSIPPKKDHTSNVTPLPPLCISEDTSRFRYTFRNGLRSAIRVARVVKETIAMNHSDVRWYVFGDDDTIFFPANIVKTLSKYDHRLWYYVGANSESCRQDWFFSFGMAYGGGGFAISSSLAKVLAKVFDSCIERYPHLYGSDGRVYSCITELGVTLTLEPGFHQVDLKGNIFGLLAAHPVTPLLSLHHLDSTNPIFPNMTTTKSLQHLFEAANVDSQRMLQQTVCYHKQFSWTISVSWGYVVQIFPNHVSLPDVLQVQETFKEWKPKNDLAGAYTFNTIPFHHDPCKRPITFYLDKVSSGKDGITISSYRKSFQNCSYKMASLQQMEVIKVFTNKLDLSIKQLQAPRRHCCDILPSRLHDQMEITTRECKDDELIYMD 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0036 472 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 9 470 - -
Lal25g0036 472 PANTHER FRINGE-RELATED 9 470 - -
Lal25g0036 472 Pfam Protein of unknown function, DUF604 193 445 IPR006740 -
Lal25g0036 472 Gene3D - 49 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0036 Lal-Chr25 255670 257323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0036 28 437 Glycosyltransferase AT1G05280 51.651 4.66e-158 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0036 - - gmx:100813816 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0036 25 255670 257323 Lal25g0036 25 255670 257323 ECH
Lal25g0036 25 255670 257323 Lal10g1293 10 18988542 18990156 LSH
Lal25g0036 25 255670 257323 Lal8g0050 8 424835 427065 LSH
Lal2g0427 2 2552191 2557395 Lal25g0036 25 255670 257323 PCT
Lal9g0394 9 2616792 2619932 Lal25g0036 25 255670 257323 PCT